RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF440Q8IYI8 595 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 ZNF680Q8NEM1 530 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.3
CCDC43-203ENST00000588210 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
CCDC43-203ENST00000588210 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 NANSQ9NR45 359 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 DLL4Q9NR61 685 aa13.15□□□□□ -0.3
CCDC43-203ENST00000588210 BSNQ9UPA5 3926 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 IGKV1D-42A0A075B6H8 117 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 SULT1B1O43704 296 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 SSNA1O43805 119 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 TGM6O95932 706 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 SLC25A1P53007 311 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 AP3S2P59780 193 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 NANOS3P60323 173 aaKnown RBP13.14□□□□□ -0.31
CCDC43-203ENST00000588210 ERVK-25P63136 954 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC43-203ENST00000588210 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 FAM209AQ5JX71 171 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 BCORP1Q8N888 145 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 OR1N1Q8NGS0 311 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 SORCS2Q96PQ0 1159 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 LMF1Q96S06 567 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 HRASLSQ9HDD0 168 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 KLHL9Q9P2J3 617 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 RCE1Q9Y256 329 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 PRR32B1ATL7 298 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 KRT33AO76009 404 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 CRYZL1O95825 349 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 PDGFAP04085 211 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 DNASE1P24855 282 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 UQCRC1P31930 480 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 ZP1P60852 638 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 MRPS10P82664 201 aaKnown RBP13.14□□□□□ -0.31
CCDC43-203ENST00000588210 OLFML2AQ68BL7 652 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 IGFL2Q6UWQ7 119 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 IGFL3Q6UXB1 125 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
CCDC43-203ENST00000588210 FAM71CQ8NEG0 241 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 BEST4Q8NFU0 473 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 RADILQ96JH8 1075 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 LCORQ96JN0 433 aaPredicted RBP13.14□□□□□ -0.31
CCDC43-203ENST00000588210 BBC3Q96PG8 261 aaPredicted RBP13.14□□□□□ -0.31
CCDC43-203ENST00000588210 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF71Q9NQZ8 489 aaPredicted RBP13.14□□□□□ -0.31
CCDC43-203ENST00000588210 COPS7AQ9UBW8 275 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 HIF3AQ9Y2N7 669 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 SLC6A5Q9Y345 797 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 V9GY05 133 aa13.14□□□□□ -0.31
CCDC43-203ENST00000588210 A0A1B0GUH1 482 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 K7EM74 188 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 GMDSO60547 372 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 ZFPL1O95159 310 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 DDAH2O95865 285 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 CALCBP10092 127 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 APEHP13798 732 aaKnown RBP13.13□□□□□ -0.31
CCDC43-203ENST00000588210 MNDAP41218 407 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 MFAP5Q13361 173 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF267Q14586 743 aaPredicted RBP13.13□□□□□ -0.31
CCDC43-203ENST00000588210 MTFR2Q6P444 385 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 LEG1Q6P5S2 330 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 SLC16A9Q7RTY1 509 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 OR52I2Q8NH67 350 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 MOSPD2Q8NHP6 518 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF721Q8TF20 911 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 DACT3Q96B18 629 aaPredicted RBP13.13□□□□□ -0.31
CCDC43-203ENST00000588210 DEFB126Q9BYW3 111 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF436Q9C0F3 470 aaPredicted RBP13.13□□□□□ -0.31
CCDC43-203ENST00000588210 LIN7BQ9HAP6 207 aa13.13□□□□□ -0.31
CCDC43-203ENST00000588210 TRBV11-1A0A0K0K1C0 115 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 HPXP02790 462 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 PSMB1P20618 241 aaKnown RBP13.12□□□□□ -0.31
CCDC43-203ENST00000588210 FUT7Q11130 342 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 NNATQ16517 81 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 LGALSLQ3ZCW2 172 aaPredicted RBP13.12□□□□□ -0.31
CCDC43-203ENST00000588210 B3GNTL1Q67FW5 361 aaPredicted RBP13.12□□□□□ -0.31
CCDC43-203ENST00000588210 FCRLAQ7L513 359 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 FAM122BQ7Z309 247 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 KCTD20Q7Z5Y7 419 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ELMOD2Q8IZ81 293 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 LRRC75AQ8NAA5 344 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 OR4C3Q8NH37 302 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 OR8K3Q8NH51 312 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ORAI1Q96D31 301 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 FOXJ3Q9UPW0 622 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 MOKQ9UQ07 419 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ERVK-19Q9WJR5 959 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 OR10H1Q9Y4A9 318 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms