RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 DNAJA3Q96EY1 480 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 TXNDC15Q96J42 360 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 SFXN2Q96NB2 322 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 TMED9Q9BVK6 235 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 HDHD5Q9BXW7 423 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 TMEM185BQ9H7F4 350 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 AKIP1Q9NQ31 210 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 DEPPQ9NTK1 212 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 PAQR5Q9NXK6 330 aaPredicted RBP9.26□□□□□ -0.93
LIG3-203ENST00000585370 ST6GALNAC2Q9UJ37 374 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 COPS3Q9UNS2 423 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 B3GNT3Q9Y2A9 372 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 COA3Q9Y2R0 106 aaPredicted RBP9.26□□□□□ -0.93
LIG3-203ENST00000585370 PMF1-BGLAPU3KQ54 211 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 SHANK1Q9Y566 2161 aa9.26□□□□□ -0.93
LIG3-203ENST00000585370 HIVEP3Q5T1R4 2406 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 A0A0J9YW62 118 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 SLC35F4A4IF30 521 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TVP23AA6NH52 213 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 ARGFXA6NJG6 315 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 E9PI62 339 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 NPIPA2E9PIF3 369 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 NPIPA3F8WFD2 350 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 CASKO14936 926 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 NME2P1O60361 137 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 ARL6IP5O75915 188 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 NME2P22392 152 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 ENPP1P22413 925 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TCEA1P23193 301 aaKnown RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 MYL9P24844 172 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 LAP3P28838 519 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 SHC1P29353 583 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 CD40LGP29965 261 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 SDC2P34741 201 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TGFBR1P36897 503 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 OPRL1P41146 370 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 GUCA1AP43080 201 aaPredicted RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 GDI2P50395 445 aaKnown RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 CCR9P51686 369 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 SLC3A1Q07837 685 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 RASGEF1BQ0VAM2 473 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 ALKBH1Q13686 389 aaKnown RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 BCL2A1Q16548 175 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 KCNMB1Q16558 191 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 YIF1BQ5BJH7 314 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 HBMQ6B0K9 141 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 VASNQ6EMK4 673 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 MZT2AQ6P582 158 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TMEM91Q6ZNR0 172 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 LINC00696Q6ZRV3 163 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 CREB3L2Q70SY1 520 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 RHOUQ7L0Q8 258 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 DPY19L4Q7Z388 723 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 YRDCQ86U90 279 aaKnown RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 GPAT4Q86UL3 456 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 LSRQ86X29 649 aaPredicted RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 SULF2Q8IWU5 870 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 ZNF679Q8IYX0 411 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TMEM178AQ8NBL3 297 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 MDS2Q8NDY4 140 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 SLC26A10Q8NG04 563 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 OR10H5Q8NGA6 315 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 OR2V1Q8NHB1 315 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 NEIL3Q8TAT5 605 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 THEM6Q8WUY1 208 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 ACOT12Q8WYK0 555 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TRMT61AQ96FX7 289 aaKnown RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 SIGLEC12Q96PQ1 595 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 OR8B4Q96RC9 309 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 RNF167Q9H6Y7 350 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 SNTG1Q9NSN8 517 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 MED29Q9NX70 200 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 ZNF281Q9Y2X9 895 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 PCDHGA9Q9Y5G4 932 aaKnown RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 SIRT4Q9Y6E7 314 aaPredicted RBP9.25□□□□□ -0.93
LIG3-203ENST00000585370 CELSR2Q9HCU4 2923 aa9.25□□□□□ -0.93
LIG3-203ENST00000585370 TRAV1-2A0A0B4J238 106 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 A0A0G2JMM0 328 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 A0A1W2PPB8 328 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 A0A1W2PRS3 328 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 KIR3DP1A8MWS1 328 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 SC5DO75845 299 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 CEACAM4O75871 244 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 OPN1LWP04000 364 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 RFPL3SP0C7P2 107 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 PGA4P0DJD7 388 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 PGA3P0DJD8 388 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 POU3F2P20265 443 aaPredicted RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 GNLYP22749 145 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 MAPK3P27361 379 aaPredicted RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 ETV6P41212 452 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 ZNF133P52736 654 aaPredicted RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 PPP5CP53041 499 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 SUCLG1P53597 346 aaKnown RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 GFRA1P56159 465 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 ADAM8P78325 824 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 PLGLB1Q02325 96 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 SLC17A1Q14916 467 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 INAQ16352 499 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms