RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 OR2T7P0C7T2 308 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 LIMS3P0CW19 117 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 LIMS4P0CW20 117 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 MYL12AP19105 171 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 RPS27P42677 84 aaKnown RBP16■□□□□ 0.15
NDEL1-217ENST00000583683 OR3A2P47893 321 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 PER3P56645 1201 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 SIRPAP78324 504 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 DCTN2Q13561 401 aaKnown RBP16■□□□□ 0.15
NDEL1-217ENST00000583683 TBCEQ15813 527 aaPredicted RBP16■□□□□ 0.15
NDEL1-217ENST00000583683 FOXL2NBQ6ZUU3 175 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 ZSCAN2Q7Z7L9 614 aaPredicted RBP16■□□□□ 0.15
NDEL1-217ENST00000583683 LHFPL3Q86UP9 236 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 SLC35F2Q8IXU6 374 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 OR6N2Q8NGY6 317 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 OR2T27Q8NH04 317 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 SEC61A2Q9H9S3 476 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 GPR35Q9HC97 309 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 ERVK13-1Q9NX77 482 aa16■□□□□ 0.15
NDEL1-217ENST00000583683 EXOSC1Q9Y3B2 195 aaKnown RBP16■□□□□ 0.15
NDEL1-217ENST00000583683 A0A1W2PQL4 384 aaPredicted RBP15.99■□□□□ 0.15
NDEL1-217ENST00000583683 ZNF593O00488 134 aaPredicted RBP15.99■□□□□ 0.15
NDEL1-217ENST00000583683 TNFSF13O75888 250 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 KRT33AO76009 404 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 PCSK6P29122 969 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 ACTC1P68032 377 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 ACTA1P68133 377 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 ADAM8P78325 824 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 DPY19L4Q7Z388 723 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 CDC20BQ86Y33 519 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 SVOPQ8N4V2 548 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 RFLNBQ8N5W9 214 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 CNEP1R1Q8N9A8 125 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 NAXEQ8NCW5 288 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 C11orf40Q8WZ69 217 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 HTRA1Q92743 480 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 PRSS50Q9UI38 385 aa15.99■□□□□ 0.15
NDEL1-217ENST00000583683 SMG1Q96Q15 3661 aaKnown RBP15.99■□□□□ 0.15
NDEL1-217ENST00000583683 NCOA6Q14686 2063 aaPredicted RBP15.99■□□□□ 0.15
NDEL1-217ENST00000583683 DAPL1A0PJW8 107 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 RPL36A-HNRNPH2H7BZ11 118 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 ATXN7O15265 892 aaPredicted RBP15.98■□□□□ 0.15
NDEL1-217ENST00000583683 PTHP01270 115 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 IL2RAP01589 272 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 GLI4P10075 376 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 ENTPD1P49961 510 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 ZNF84P51523 738 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 ZNF85Q03923 595 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 NEDD8Q15843 81 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 PCK2Q16822 640 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 CEACAM16Q2WEN9 425 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 VWA1Q6PCB0 445 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 SSX6Q7RTT6 188 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 OR6K3Q8NGY3 331 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 ZFP3Q96NJ6 502 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 POLE4Q9NR33 117 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 INPP5EQ9NRR6 644 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 UPB1Q9UBR1 384 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 MALT1Q9UDY8 824 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 COPS3Q9UNS2 423 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 ERGIC3Q9Y282 383 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 COL6A6A6NMZ7 2263 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 H3BSA7 217 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 TMIGD3P0DMS9 266 aaPredicted RBP15.98■□□□□ 0.15
NDEL1-217ENST00000583683 ZNF823P16415 610 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 CEACAM8P31997 349 aaPredicted RBP15.98■□□□□ 0.15
NDEL1-217ENST00000583683 KCNMB1Q16558 191 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 TEX30Q5JUR7 227 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 FBXW9Q5XUX1 488 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 TFAP2EQ6VUC0 442 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 UBE2J2Q8N2K1 259 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 NANOGP1Q8N7R0 232 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 OTOSQ8NHW6 89 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 NABP1Q96AH0 204 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 NELFAQ9H3P2 528 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 RSL24D1Q9UHA3 163 aaKnown RBP15.98■□□□□ 0.15
NDEL1-217ENST00000583683 KCNG2Q9UJ96 466 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 SH3BGRL2Q9UJC5 107 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 KLHDC2Q9Y2U9 406 aa15.98■□□□□ 0.15
NDEL1-217ENST00000583683 POLEQ07864 2286 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 TMEM129A0AVI4 362 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 CCDC160A6NGH7 325 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 ZNF587BE7ETH6 402 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 LCKP06239 509 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 CRHP06850 196 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 SPARCP09486 303 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 CD79BP40259 229 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 MRPS34P82930 218 aaKnown RBP15.97■□□□□ 0.15
NDEL1-217ENST00000583683 FAPQ12884 760 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 GALEQ14376 348 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 EIF2S3LQ2VIR3 472 aaKnown RBP15.97■□□□□ 0.15
NDEL1-217ENST00000583683 OR2G6Q5TZ20 316 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 ALG8Q9BVK2 526 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 MND1Q9BWT6 205 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 EMC7Q9NPA0 242 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 TMEM38BQ9NVV0 291 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 CACNA1CQ13936 2221 aa15.97■□□□□ 0.15
NDEL1-217ENST00000583683 ZNF99A8MXY4 864 aaPredicted RBP15.96■□□□□ 0.15
NDEL1-217ENST00000583683 MYL12BO14950 172 aa15.96■□□□□ 0.15
NDEL1-217ENST00000583683 ALOX5APP20292 161 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms