RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NSMAFQ92636 917 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 HTRA1Q92743 480 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 GTPBP3Q969Y2 492 aaKnown RBP21.56■■□□□ 1.04
TSEN54-209ENST00000583454 ERMAPQ96PL5 475 aaPredicted RBP21.56■■□□□ 1.04
TSEN54-209ENST00000583454 FEVQ99581 238 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 SH3GL3Q99963 347 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 IFT27Q9BW83 186 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 EGLN3Q9H6Z9 239 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 NTN4Q9HB63 628 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 ARMC1Q9NVT9 282 aa21.56■■□□□ 1.04
TSEN54-209ENST00000583454 UBL3O95164 117 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 CD79AP11912 226 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 NPR2P20594 1047 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 CDAP32320 146 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 CDKN2AP42771 156 aaKnown RBP21.55■■□□□ 1.04
TSEN54-209ENST00000583454 RAB1AP62820 205 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 PIGFQ07326 219 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 COX10Q12887 443 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 PTCHD4Q6ZW05 846 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 DEPDC4Q8N2C3 294 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 NABP1Q96AH0 204 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 TRMT61AQ96FX7 289 aaKnown RBP21.55■■□□□ 1.04
TSEN54-209ENST00000583454 GRIP2Q9C0E4 1043 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 SEC61A2Q9H9S3 476 aa21.55■■□□□ 1.04
TSEN54-209ENST00000583454 CISD1Q9NZ45 108 aaKnown RBP21.55■■□□□ 1.04
TSEN54-209ENST00000583454 YLPM1P49750 1951 aaKnown RBP21.55■■□□□ 1.04
TSEN54-209ENST00000583454 E7EQL1 145 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 SOCS2O14508 198 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 DEAF1O75398 565 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-209ENST00000583454 TIPRLO75663 272 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 TP53P04637 393 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-209ENST00000583454 CELA3BP08861 270 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 GIPRP48546 466 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 IDH3GP51553 393 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-209ENST00000583454 CDH11P55287 796 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 NAAAQ02083 359 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 MYPOPQ86VE0 399 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-209ENST00000583454 SNX18Q96RF0 628 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 REG4Q9BYZ8 158 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 PLA2G12AQ9BZM1 189 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 PDP1Q9P0J1 537 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-209ENST00000583454 MOKQ9UQ07 419 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 AP4S1Q9Y587 144 aa21.54■■□□□ 1.04
TSEN54-209ENST00000583454 BHLHE40O14503 412 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 E2F6O75461 281 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 CRYAAP02489 173 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 PATE4P0C8F1 98 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 CTLA4P16410 223 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 ZNF14P17017 642 aaPredicted RBP21.53■■□□□ 1.04
TSEN54-209ENST00000583454 FAM27BQ5VT28 67 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 B3GLCTQ6Y288 498 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 SLC16A14Q7RTX9 510 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 IL17RDQ8NFM7 739 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 OR8D4Q8NGM9 314 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 NRBF2Q96F24 287 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 NIPSNAP1Q9BPW8 284 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 GDF2Q9UK05 429 aaPredicted RBP21.53■■□□□ 1.04
TSEN54-209ENST00000583454 FBXL3Q9UKT7 428 aa21.53■■□□□ 1.04
TSEN54-209ENST00000583454 ATP6V1G2-DDX39BF2Z307 99 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 CRLF1O75462 422 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 HIST1H1CP16403 213 aaKnown RBP21.52■■□□□ 1.04
TSEN54-209ENST00000583454 NPRL3Q12980 569 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 ATP6AP1Q15904 470 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 SGCAQ16586 387 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 SLC36A2Q495M3 483 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 OR52L1Q8NGH7 329 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 SYT4Q9H2B2 425 aa21.52■■□□□ 1.04
TSEN54-209ENST00000583454 RAB36O95755 333 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 IGFBP1P08833 259 aaPredicted RBP21.51■■□□□ 1.03
TSEN54-209ENST00000583454 MMP7P09237 267 aaPredicted RBP21.51■■□□□ 1.03
TSEN54-209ENST00000583454 CALCRP30988 508 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 PTDSS1P48651 473 aaKnown RBP21.51■■□□□ 1.03
TSEN54-209ENST00000583454 ACTR3P61158 418 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 CLEC12AQ5QGZ9 265 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 SHQ1Q6PI26 577 aaKnown RBP21.51■■□□□ 1.03
TSEN54-209ENST00000583454 HS3ST5Q8IZT8 346 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 LNX2Q8N448 690 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 LRRC18Q8N456 261 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 MS4A3Q96HJ5 214 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 DHRS9Q9BPW9 319 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 KCNS3Q9BQ31 491 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 NUAK2Q9H093 628 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 REV1Q9UBZ9 1251 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 POU2F3Q9UKI9 436 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 ATP23Q9Y6H3 246 aa21.51■■□□□ 1.03
TSEN54-209ENST00000583454 IGHV2OR16-5A0A0B4J2B6 119 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 SLC16A7O60669 478 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 KHDRBS3O75525 346 aaKnown RBP21.5■■□□□ 1.03
TSEN54-209ENST00000583454 SERPINA5P05154 406 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 NOS3P29474 1203 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 GUCA1AP43080 201 aaPredicted RBP21.5■■□□□ 1.03
TSEN54-209ENST00000583454 C11orf71Q6IPW1 123 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 TMEM53Q6P2H8 277 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 ZNF584Q8IVC4 421 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 OR4K13Q8NH42 304 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 NMNAT3Q96T66 252 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 DDOQ99489 341 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 TSSK6Q9BXA6 273 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 POLE4Q9NR33 117 aa21.5■■□□□ 1.03
TSEN54-209ENST00000583454 A0A1W2PPL8 197 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms