RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SGCAQ16586 387 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 TMEM236Q5W0B7 351 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 OR7E24Q6IFN5 339 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 FAHD1Q6P587 224 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 LEG1Q6P5S2 330 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 ANKRD16Q6P6B7 361 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 PTCHD4Q6ZW05 846 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 PQLC1Q8N2U9 271 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 SDR9C7Q8NEX9 313 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 SMAP2Q8WU79 429 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-205ENST00000571028 BCL2L2Q92843 193 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-205ENST00000571028 OTULINQ96BN8 352 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 GPX7Q96SL4 187 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-205ENST00000571028 NMNAT3Q96T66 252 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 FOXB1Q99853 325 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 ALG12Q9BV10 488 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 SYT4Q9H2B2 425 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 FN3KQ9H479 309 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 SEC61A2Q9H9S3 476 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
CCDC40-205ENST00000571028 SLC17A5Q9NRA2 495 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 IL20Q9NYY1 176 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 RNF115Q9Y4L5 304 aa11.6□□□□□ -0.55
CCDC40-205ENST00000571028 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 SLC22A23A1A5C7 686 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 PRSS37A4D1T9 235 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 H0YHG0 523 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 OVOL3O00110 214 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 ARPC3O15145 178 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 SOD3P08294 240 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 CD79AP11912 226 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 SRD5A1P18405 259 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 ELF3P78545 371 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-205ENST00000571028 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC40-205ENST00000571028 GINS1Q14691 196 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 PGGHGQ32M88 737 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 OTPQ5XKR4 325 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 CD300LDQ6UXZ3 194 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-205ENST00000571028 WDR31Q8NA23 367 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 CYB561A3Q8NBI2 242 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 OR2T33Q8NG76 320 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 HSD17B8Q92506 261 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 MUS81Q96NY9 551 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 TSSK2Q96PF2 358 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 SH3GL3Q99963 347 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 RIBC2Q9H4K1 309 aa11.59□□□□□ -0.55
CCDC40-205ENST00000571028 CENPBD1B2RD01 187 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 M0R1B8 84 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 BHLHE40O14503 412 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 EI24O14681 340 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 GPRIN2O60269 458 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 TXNDC12O95881 172 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 HLA-HP01893 362 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 CD3EP07766 207 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 PATE4P0C8F1 98 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 NR2C1P13056 603 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 APEHP13798 732 aaKnown RBP11.58□□□□□ -0.56
CCDC40-205ENST00000571028 ANPEPP15144 967 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 IGFBP5P24593 272 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 THBS2P35442 1172 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 NUDT6P53370 316 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 CRISP1P54107 249 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 SH3BGRP55822 239 aaPredicted RBP11.58□□□□□ -0.56
CCDC40-205ENST00000571028 PIGFQ07326 219 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 HIST3H3Q16695 136 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 LRRC36Q1X8D7 754 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 TMEM249Q2WGJ8 235 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 ZIK1Q3SY52 487 aaPredicted RBP11.58□□□□□ -0.56
CCDC40-205ENST00000571028 TIMM23BQ5SRD1 257 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 THEM4Q5T1C6 240 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 LIPNQ5VXI9 398 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 SLC25A47Q6Q0C1 308 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 ADCK1Q86TW2 530 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 LRRC18Q8N456 261 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 CBR4Q8N4T8 237 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 C1orf162Q8NEQ5 155 aaPredicted RBP11.58□□□□□ -0.56
CCDC40-205ENST00000571028 EME1Q96AY2 570 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 NUAK2Q9H093 628 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 GABARAPL1Q9H0R8 117 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 NELFAQ9H3P2 528 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 ESRP2Q9H6T0 727 aaKnown RBP11.58□□□□□ -0.56
CCDC40-205ENST00000571028 RNF121Q9H920 327 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 NGBQ9NPG2 151 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 RPRD1BQ9NQG5 326 aaKnown RBP11.58□□□□□ -0.56
CCDC40-205ENST00000571028 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
CCDC40-205ENST00000571028 ALPK2Q86TB3 2170 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 IDH3BO43837 385 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 SSX4O60224 188 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 KHDRBS3O75525 346 aaKnown RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 GPANK1O95872 356 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 WNT11O96014 354 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 CTLA4P16410 223 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 GUCA1AP43080 201 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 GIPRP48546 466 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 SRSF2Q01130 221 aaKnown RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 NPRL3Q12980 569 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 TRIP10Q15642 601 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms