RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PKMYT1Q99640 499 aa0.88□□□□□ -2.27
CDH1-211ENST00000567320 LRRN3Q9H3W5 708 aa0.88□□□□□ -2.27
CDH1-211ENST00000567320 C21orf62Q9NYP8 219 aa0.88□□□□□ -2.27
CDH1-211ENST00000567320 TMED5Q9Y3A6 229 aa0.88□□□□□ -2.27
CDH1-211ENST00000567320 TSSC4Q9Y5U2 329 aaPredicted RBP0.88□□□□□ -2.27
CDH1-211ENST00000567320 NACADO15069 1562 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 ANKRD12Q6UB98 2062 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 CEACAM18A8MTB9 384 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 FGF1P05230 155 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 ASGR1P07306 291 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 PFN1P07737 140 aaKnown RBP0.87□□□□□ -2.27
CDH1-211ENST00000567320 CAMLGP49069 296 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 FAM53BQ14153 422 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 CLINT1Q14677 625 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 GANABQ14697 944 aaKnown RBP0.87□□□□□ -2.27
CDH1-211ENST00000567320 TPD52L1Q16890 204 aaPredicted RBP0.87□□□□□ -2.27
CDH1-211ENST00000567320 KCTD21Q4G0X4 260 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 MPV17L2Q567V2 206 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 CCNJQ5T5M9 372 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 ANKRD22Q5VYY1 191 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 C16orf47Q6ZP98 133 aaPredicted RBP0.87□□□□□ -2.27
CDH1-211ENST00000567320 METTL13Q8N6R0 699 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 OR6N1Q8NGY5 312 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 CMTM2Q8TAZ6 248 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 OSTF1Q92882 214 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 NTAN1Q96AB6 310 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 TGM7Q96PF1 710 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 SEC22CQ9BRL7 303 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 ZNF649Q9BS31 505 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 C1orf50Q9BV19 199 aa0.87□□□□□ -2.27
CDH1-211ENST00000567320 FGF23Q9GZV9 251 aaPredicted RBP0.87□□□□□ -2.27
CDH1-211ENST00000567320 EXOSC4Q9NPD3 245 aaKnown RBP0.87□□□□□ -2.27
CDH1-211ENST00000567320 NOL7Q9UMY1 257 aaKnown RBP0.87□□□□□ -2.27
CDH1-211ENST00000567320 TRAV19A0A0A6YYK7 116 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 RAMP3O60896 148 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 EIF3GO75821 320 aaKnown RBP eCLIP0.86□□□□□ -2.27
CDH1-211ENST00000567320 RAB3BP20337 219 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 PSMB5P28074 263 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 LAP3P28838 519 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 HSD17B2P37059 387 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 FDFT1P37268 417 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 PRMT2P55345 433 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 UBE2NP61088 152 aaKnown RBP0.86□□□□□ -2.27
CDH1-211ENST00000567320 CRADDP78560 199 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 CDH17Q12864 832 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 SELPLGQ14242 412 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 USH1GQ495M9 461 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 FAM222AQ5U5X8 452 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 GUSBP11Q6P575 273 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 FBXW12Q6X9E4 464 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 TMEM135Q86UB9 458 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 TMEM123Q8N131 208 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 HDDC3Q8N4P3 179 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.86□□□□□ -2.27
CDH1-211ENST00000567320 PTX4Q96A99 478 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 NPY6RQ99463 290 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 GPA33Q99795 319 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 TCHPQ9BT92 498 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 TRMT112Q9UI30 125 aaKnown RBP0.86□□□□□ -2.27
CDH1-211ENST00000567320 PIN4Q9Y237 131 aaKnown RBP0.86□□□□□ -2.27
CDH1-211ENST00000567320 POLDIP2Q9Y2S7 368 aa0.86□□□□□ -2.27
CDH1-211ENST00000567320 ARHGEF35A5YM69 484 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 TRIM64A6NGJ6 449 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 TRIM64BA6NI03 449 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 GPR89AB7ZAQ6 455 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 C4orf51C9J302 202 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 F6UB75 175 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 MFNGO00587 321 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 AIFM1O95831 613 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 IGLV3-25P01717 112 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 IGHV2-5P01817 119 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 GPR89BP0CG08 455 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 ZNF35P13682 527 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 OPRD1P41143 372 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 EPS15P42566 896 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 PPP1CBP62140 327 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 CDK16Q00536 496 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 SCGB2A2Q13296 93 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 PGGHGQ32M88 737 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 FILIP1LQ4L180 1135 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 NT5DC3Q86UY8 548 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 FADS6Q8N9I5 356 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 HSD17B10Q99714 261 aaKnown RBP0.85□□□□□ -2.27
CDH1-211ENST00000567320 RSG1Q9BU20 258 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 FAIM2Q9BWQ8 316 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 KRT23Q9C075 422 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 RWDD1Q9H446 243 aaPredicted RBP0.85□□□□□ -2.27
CDH1-211ENST00000567320 EDA2RQ9HAV5 297 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 RAB18Q9NP72 206 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 MCTS1Q9ULC4 181 aaKnown RBP0.85□□□□□ -2.27
CDH1-211ENST00000567320 KNSTRNQ9Y448 316 aa0.85□□□□□ -2.27
CDH1-211ENST00000567320 SDHAF1A6NFY7 115 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 CCL21O00585 134 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 CCDC22O60826 627 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 REM1O75628 298 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 MT-ND3P03897 115 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 HEXBP07686 556 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 CCNB1P14635 433 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 CA8P35219 290 aa0.84□□□□□ -2.27
CDH1-211ENST00000567320 IDH2P48735 452 aaKnown RBP0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms