RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CGGBP1Q9UFW8 167 aaPredicted RBP12.76□□□□□ -0.37
RNF40-209ENST00000566703 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
RNF40-209ENST00000566703 WIPI2Q9Y4P8 454 aa12.76□□□□□ -0.37
RNF40-209ENST00000566703 TIMM10BQ9Y5J6 103 aa12.76□□□□□ -0.37
RNF40-209ENST00000566703 A0A0G2JMP0 313 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 A0A0X1KG70 313 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 FXYD1O00168 92 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 PLPP2O43688 288 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 SLC2A10O95528 541 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 IGHV2-5P01817 119 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 CST2P09228 141 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 TNFRSF1BP20333 461 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 CCNOP22674 350 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 GATA3P23771 443 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 CDAP32320 146 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 GUCA1AP43080 201 aaPredicted RBP12.75□□□□□ -0.37
RNF40-209ENST00000566703 COMPP49747 757 aaPredicted RBP12.75□□□□□ -0.37
RNF40-209ENST00000566703 MMP15P51511 669 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 RPL27P61353 136 aaKnown RBP12.75□□□□□ -0.37
RNF40-209ENST00000566703 PCBD1P61457 104 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 PSG4Q00888 419 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 CD47Q08722 323 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 MAPRE2Q15555 327 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 ALG10Q5BKT4 473 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 FOXL2NBQ6ZUU3 175 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 ICA1LQ8NDH6 482 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 OR4M2Q8NGB6 313 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 KLF14Q8TD94 323 aaPredicted RBP12.75□□□□□ -0.37
RNF40-209ENST00000566703 C10orf82Q8WW14 230 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 DIRC2Q96SL1 478 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 EGLN1Q9GZT9 426 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 ELOVL3Q9HB03 270 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 GID8Q9NWU2 228 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 KLHL21Q9UJP4 597 aa12.75□□□□□ -0.37
RNF40-209ENST00000566703 LOC100509620A0A075B734 347 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 IGKV1D-43A0A0B4J1Z2 117 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 PLSCR5A0PG75 271 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 C5orf49A4QMS7 147 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 A6NIZ1 184 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 TRIM77I1YAP6 450 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 IGHV1-46P01743 117 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 IGHMP01871 453 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 EPHA1P21709 976 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 TUBG1P23258 451 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 WNT5AP41221 380 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 OR1E2P47887 323 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 ARFIP2P53365 341 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 RAP1BP61224 184 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 RAP1AP62834 184 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 SELENOWP63302 87 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 TSTQ16762 297 aaKnown RBP12.74□□□□□ -0.37
RNF40-209ENST00000566703 CYBRD1Q53TN4 286 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 AVPI1Q5T686 147 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 ARL9Q6T311 187 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 C1orf229Q6ZS94 237 aaPredicted RBP12.74□□□□□ -0.37
RNF40-209ENST00000566703 ZER1Q7Z7L7 766 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 ZNF101Q8IZC7 436 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 PCYOX1LQ8NBM8 494 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 SLC25A40Q8TBP6 338 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 FAM216AQ8WUB2 273 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 NSMAFQ92636 917 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 BPIFA2Q96DR5 249 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 PRRC1Q96M27 445 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 TMPRSS13Q9BYE2 586 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 OR2H1Q9GZK4 316 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 TUBG2Q9NRH3 451 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 ZDHHC8Q9ULC8 765 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 A4GNTQ9UNA3 340 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 AP3M1Q9Y2T2 418 aa12.74□□□□□ -0.37
RNF40-209ENST00000566703 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 MRASO14807 208 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 SPRY3O43610 288 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 SHOX2O60902 331 aaPredicted RBP12.73□□□□□ -0.37
RNF40-209ENST00000566703 UBOX5O94941 541 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 AVPP01185 164 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 CD55P08174 381 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 IFI30P13284 250 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 CFPP27918 469 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 LAP3P28838 519 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 LIMS1P48059 325 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 ARHGDIAP52565 204 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 HILS1P60008 231 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 CTXN1P60606 82 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 PPP1CBP62140 327 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 KLF10Q13118 480 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 ZMAT1Q5H9K5 638 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 C1QL2Q7Z5L3 287 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 PEG10Q86TG7 708 aaKnown RBP12.73□□□□□ -0.37
RNF40-209ENST00000566703 TREML1Q86YW5 311 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 RNF113BQ8IZP6 322 aaKnown RBP12.73□□□□□ -0.37
RNF40-209ENST00000566703 LRRC75AQ8NAA5 344 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 AKR7LQ8NHP1 331 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 NANPQ8TBE9 248 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 CCL17Q92583 94 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 RBM4Q9BWF3 364 aaKnown RBP12.73□□□□□ -0.37
RNF40-209ENST00000566703 OR2J1Q9GZK6 312 aa12.73□□□□□ -0.37
RNF40-209ENST00000566703 WNT5BQ9H1J7 359 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms