RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 MSR1P21757 451 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 LAP3P28838 519 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 PYCR1P32322 319 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 GUCA1AP43080 201 aaPredicted RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 AQP4P55087 323 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 TUBA1BP68363 451 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 TUBA4AP68366 448 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 MRPS34P82930 218 aaKnown RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 TAB1Q15750 504 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 NRN1LQ496H8 165 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 TIMM23BQ5SRD1 257 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 MEX3BQ6ZN04 569 aaKnown RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 FOXL2NBQ6ZUU3 175 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 TUBA1AQ71U36 451 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 ZNF627Q7L945 461 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 ZBTB46Q86UZ6 589 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 P2RY8Q86VZ1 359 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 WFDC8Q8IUA0 241 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 GLB1L2Q8IW92 636 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 SLC22A24Q8N4F4 322 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 TCEANCQ8N8B7 351 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 OR51L1Q8NGJ5 315 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 OR6K6Q8NGW6 343 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 OR52N5Q8NH56 324 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 TMEM163Q8TC26 289 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 BCL2L2Q92843 193 aaPredicted RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 NABP1Q96AH0 204 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 ZC3HAV1LQ96H79 300 aaKnown RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 MUS81Q96NY9 551 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 IL4I1Q96RQ9 567 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 ADI1Q9BV57 179 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 HCAR1Q9BXC0 346 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 NMNAT2Q9BZQ4 307 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 SRA1Q9HD15 236 aaKnown RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 OBP2BQ9NPH6 170 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 POLE4Q9NR33 117 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 FAM118AQ9NWS6 357 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 NDRG3Q9UGV2 375 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 NDRG4Q9ULP0 352 aaKnown RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 COA3Q9Y2R0 106 aaPredicted RBP10.04□□□□□ -0.8
KARS-207ENST00000566560 POLR1DQ9Y2S0 133 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 AMDHD2Q9Y303 409 aa10.04□□□□□ -0.8
KARS-207ENST00000566560 ARPC4-TTLL3A0A0A6YYG9 625 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 LOC100130705A0A1B0GUX0 176 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 E9PQ18 207 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 PRODHO43272 600 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 TLX2O43763 284 aaPredicted RBP10.03□□□□□ -0.8
KARS-207ENST00000566560 GPANK1O95872 356 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 WNT11O96014 354 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 HLA-DQA2P01906 255 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 KIR2DL3P43628 341 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 RPS7P62081 194 aaKnown RBP10.03□□□□□ -0.8
KARS-207ENST00000566560 KEAP1Q14145 624 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 PPA1Q15181 289 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 SGCAQ16586 387 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 KLHL12Q53G59 568 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 IZUMO2Q6UXV1 221 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 SLC16A14Q7RTX9 510 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.03□□□□□ -0.8
KARS-207ENST00000566560 CPOQ8IVL8 374 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 DMRTC2Q8IXT2 367 aaPredicted RBP10.03□□□□□ -0.8
KARS-207ENST00000566560 LRRC18Q8N456 261 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 DHRSXQ8N5I4 330 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 BBS1Q8NFJ9 593 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 OR8J1Q8NGP2 316 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 LINC01560Q8TB33 94 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 HSD17B8Q92506 261 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 MUCL1Q96DR8 90 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 BOD1Q96IK1 185 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 WFIKKN1Q96NZ8 548 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 SH3GL3Q99963 347 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 APOL4Q9BPW4 351 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 OR51V1Q9H2C8 321 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 SIAEQ9HAT2 523 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 EMC7Q9NPA0 242 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 CRIM1Q9NZV1 1036 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 SLC25A15Q9Y619 301 aa10.03□□□□□ -0.8
KARS-207ENST00000566560 ZNF503-AS2A6NEH8 195 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 H0YJX3 145 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 SLC16A6O15403 523 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 UBL3O95164 117 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 HLA-HP01893 362 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 CD79AP11912 226 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 CAPGP40121 348 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 VHLP40337 213 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 APOFQ13790 326 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 SNCBQ16143 134 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 MEP1BQ16820 701 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 GSG1Q2KHT4 349 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 SLC36A2Q495M3 483 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 LCN1P1Q5VSP4 162 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 NXNL2Q5VZ03 156 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 TTC23Q5W5X9 447 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 OTPQ5XKR4 325 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 TREML4Q6UXN2 200 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 GID4Q8IVV7 300 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 SKA3Q8IX90 412 aa10.02□□□□□ -0.81
KARS-207ENST00000566560 CCDC36Q8IYA8 594 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms