RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 DCDC2BA2VCK2 349 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 RPP14O95059 124 aaKnown RBP17.38■□□□□ 0.37
CLN6-205ENST00000564846 QDPRP09417 244 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 CSNK1A1P48729 337 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 MTNR1BP49286 362 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 NANOS3P60323 173 aaKnown RBP17.38■□□□□ 0.37
CLN6-205ENST00000564846 OTPQ5XKR4 325 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 ABLIM2Q6H8Q1 611 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 LRRC69Q6ZNQ3 347 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 TRILQ7L0X0 811 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 ZIC4Q8N9L1 334 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 TEX19Q8NA77 164 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 OR52N5Q8NH56 324 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 C11orf40Q8WZ69 217 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 TMEM54Q969K7 222 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 INTS12Q96CB8 462 aaKnown RBP17.38■□□□□ 0.37
CLN6-205ENST00000564846 IQCMA0A1B0GVH7 501 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 CEACAM4O75871 244 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 GATBO75879 557 aaKnown RBP17.38■□□□□ 0.37
CLN6-205ENST00000564846 CLEC2LP0C7M8 214 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 SDHBP21912 280 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 ALKBH1Q13686 389 aaKnown RBP17.38■□□□□ 0.37
CLN6-205ENST00000564846 BCL2A1Q16548 175 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 YIF1BQ5BJH7 314 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 KRT77Q7Z794 578 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 CROCCP3Q8IVE0 287 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 TMEM123Q8N131 208 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 OR6N1Q8NGY5 312 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 PHYHIPQ92561 330 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 SLC6A15Q9H2J7 730 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 KLK13Q9UKR3 277 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 RCE1Q9Y256 329 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 ZNF281Q9Y2X9 895 aa17.38■□□□□ 0.37
CLN6-205ENST00000564846 A0A1W2PPL8 197 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 ZNF716A6NP11 495 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 ZNF708P17019 499 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 CALRP27797 417 aaKnown RBP17.37■□□□□ 0.37
CLN6-205ENST00000564846 ZNF133P52736 654 aaPredicted RBP17.37■□□□□ 0.37
CLN6-205ENST00000564846 CLDN18P56856 261 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 HNRNPA0Q13151 305 aaKnown RBP17.37■□□□□ 0.37
CLN6-205ENST00000564846 SLC10A1Q14973 349 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 FDX2Q6P4F2 183 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 LRFN4Q6PJG9 635 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 DEGS2Q6QHC5 323 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 LRRN1Q6UXK5 716 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 MEIOBQ8N635 442 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 RNF128Q8TEB7 428 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 AP3S1Q92572 193 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 KCNS3Q9BQ31 491 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 PDCD1LG2Q9BQ51 273 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 SLC24A3Q9HC58 644 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 PAQR5Q9NXK6 330 aaPredicted RBP17.37■□□□□ 0.37
CLN6-205ENST00000564846 KCNMB2Q9Y691 235 aa17.37■□□□□ 0.37
CLN6-205ENST00000564846 FREM3P0C091 2139 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 DVL2O14641 736 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 CYTIPO60759 359 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ZNF254O75437 659 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ZNF432O94892 652 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ZFPL1O95159 310 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ACTL6AO96019 429 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 BMP4P12644 408 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 RIDAP52758 137 aaKnown RBP17.36■□□□□ 0.37
CLN6-205ENST00000564846 RPS11P62280 158 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLN6-205ENST00000564846 FOXC1Q12948 553 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ZMAT1Q5H9K5 638 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 DCXRQ7Z4W1 244 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ST7LQ8TDW4 575 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ROBO4Q8WZ75 1007 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 HSD17B8Q92506 261 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 ABTB1Q969K4 478 aaPredicted RBP17.36■□□□□ 0.37
CLN6-205ENST00000564846 MAP6Q96JE9 813 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 SEC61A2Q9H9S3 476 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 PALMDQ9NP74 551 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 FRRS1LQ9P0K9 344 aa17.36■□□□□ 0.37
CLN6-205ENST00000564846 PTPRZ1P23471 2315 aaPredicted RBP17.36■□□□□ 0.37
CLN6-205ENST00000564846 SHISA3A0PJX4 238 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 KLK10O43240 276 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 ARL6IP5O75915 188 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 MYL9P24844 172 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 RASGEF1BQ0VAM2 473 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 KCNMB1Q16558 191 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 C10orf128Q5T292 105 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 FCRLAQ7L513 359 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 TPRA1Q86W33 373 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 MFSD4AQ8N468 514 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 OR13C5Q8NGS8 318 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 OR2G2Q8NGZ5 317 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 OR5AK2Q8NH90 309 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 ZNF845Q96IR2 970 aaPredicted RBP17.35■□□□□ 0.37
CLN6-205ENST00000564846 DCBLD2Q96PD2 775 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 SMURF1Q9HCE7 757 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 PLEKHB1Q9UF11 243 aaPredicted RBP17.35■□□□□ 0.37
CLN6-205ENST00000564846 CYB5R1Q9UHQ9 305 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 FLVCR1Q9Y5Y0 555 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 TMEM212A6NML5 194 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 EFSO43281 561 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 CCR9P51686 369 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 INAQ16352 499 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 ZNF544Q6NX49 715 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 UNQ9370/PRO34162Q6UXP9 181 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms