RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 PRSS23O95084 383 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 MT-ND5P03915 603 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 IFNW1P05000 195 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 ADH4P08319 380 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 SRP14P37108 136 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 SLC9A3P48764 834 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 MMP15P51511 669 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 RAP1BP61224 184 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 RAP1AP62834 184 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 CCL8P80075 99 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 TRAM2Q15035 370 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 SGCAQ16586 387 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 ALKBH6Q3KRA9 238 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 FAM209AQ5JX71 171 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 MBNL2Q5VZF2 373 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 C8orf82Q6P1X6 216 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 CBLL1Q75N03 491 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 SYT9Q86SS6 491 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 NRMQ8IXM6 262 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 ZNF101Q8IZC7 436 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 ACOT11Q8WXI4 607 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 NSMAFQ92636 917 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 HOPXQ9BPY8 73 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 OR2H1Q9GZK4 316 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 OR51B6Q9H340 312 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 TREM2Q9NZC2 230 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 EIF3KQ9UBQ5 218 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 TIMM10BQ9Y5J6 103 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 SNX13Q9Y5W8 968 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 IGHV1-69-2A0A0G2JMI3 117 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 LAP3P28838 519 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 GDI2P50395 445 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 CTXN1P60606 82 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 PCBD1P61457 104 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 SRSF2Q01130 221 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 LIPEQ05469 1076 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 ZNF718Q3SXZ3 478 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 TMPRSS11FQ6ZWK6 438 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 VTCN1Q7Z7D3 282 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 ALDH16A1Q8IZ83 802 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 OR51F2Q8NH61 342 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 AKR7LQ8NHP1 331 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 GEMIN6Q8WXD5 167 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 FNDC11Q9BVV2 318 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 WNT5BQ9H1J7 359 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 ANKRD19PQ9H560 264 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 HIF1ANQ9NWT6 349 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 ARMCX1Q9P291 453 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 CGGBP1Q9UFW8 167 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 KLHL21Q9UJP4 597 aa14.66□□□□□ -0.06
VPS9D1-203ENST00000563798 A0A087WUU8 490 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 A0A0A6YYJ9 748 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 TRAV20A0A0B4J274 112 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 C5orf49A4QMS7 147 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 EFCAB9A8MZ26 197 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 J3KTA2 159 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 CXCR6O00574 342 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 AHCYL1O43865 530 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 ANPEPP15144 967 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 DRD4P21917 467 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 LIPAP38571 399 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 ZNF81P51508 661 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 ERVK-25P63136 954 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 GUCY1A3Q02108 690 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 SF3A3Q12874 501 aaKnown RBP eCLIP14.65□□□□□ -0.062e-6■■■■□ 21.8
VPS9D1-203ENST00000563798 TOP3AQ13472 1001 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 IFI44LQ53G44 452 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 TMEM255AQ5JRV8 349 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 HACD2Q6Y1H2 254 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 MBOAT2Q6ZWT7 520 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 OAFQ86UD1 273 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 CLDN22Q8N7P3 220 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 OR51A7Q8NH64 312 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 KLF14Q8TD94 323 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 NARFLQ9H6Q4 476 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 CYSLTR2Q9NS75 346 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 ZNF446Q9NWS9 450 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 GMPR2Q9P2T1 348 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 METRNQ9UJH8 293 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 GRIP1Q9Y3R0 1128 aa14.65□□□□□ -0.06
VPS9D1-203ENST00000563798 TRAV27A0A087WT01 109 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 NME4O00746 187 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 CDC14BO60729 498 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 DEAF1O75398 565 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 IGHV1-46P01743 117 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 COX5BP10606 129 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 COX4I1P13073 169 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 MSR1P21757 451 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 CCNOP22674 350 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 TUBG1P23258 451 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 GCH1P30793 250 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 GUCA1AP43080 201 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 YAP1P46937 504 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 ENDOGQ14249 297 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 RINLQ6ZS11 566 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 USP51Q70EK9 711 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 IGFN1Q86VF2 1251 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 POU5F2Q8N7G0 328 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 SLC25A40Q8TBP6 338 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 IPCEF1Q8WWN9 437 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms