RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 NPR2P20594 1047 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 PRKACGP22612 351 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 LAP3P28838 519 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 TTKP33981 857 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 FABP6P51161 128 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 RPS6KA3P51812 740 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 PSG4Q00888 419 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 ATP6AP1Q15904 470 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 SGCAQ16586 387 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 SWI5Q1ZZU3 235 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 CLEC12AQ5QGZ9 265 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 SLC35F1Q5T1Q4 408 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 OTPQ5XKR4 325 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 SLC16A14Q7RTX9 510 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 DPPA2Q7Z7J5 298 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 ZBTB46Q86UZ6 589 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 OR6V1Q8N148 313 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 LNX2Q8N448 690 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 PAQR4Q8N4S7 273 aaPredicted RBP7.39□□□□□ -1.23
UBR1-204ENST00000563239 NPEPL1Q8NDH3 523 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 CPEB3Q8NE35 698 aaKnown RBP7.39□□□□□ -1.23
UBR1-204ENST00000563239 NUP37Q8NFH4 326 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 OR4K13Q8NH42 304 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 ZNRF4Q8WWF5 429 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 SNX18Q96RF0 628 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 NMNAT3Q96T66 252 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 ZNF416Q9BWM5 594 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 GRIP2Q9C0E4 1043 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 NDEL1Q9GZM8 345 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 NUAK2Q9H093 628 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 WNT5BQ9H1J7 359 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 EMC7Q9NPA0 242 aa7.39□□□□□ -1.23
UBR1-204ENST00000563239 PDP1Q9P0J1 537 aaPredicted RBP7.39□□□□□ -1.23
UBR1-204ENST00000563239 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
UBR1-204ENST00000563239 A0A1W2PPL8 197 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 TMEM129A0AVI4 362 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 GNGT2O14610 69 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 SMPD2O60906 423 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 TMCC2O75069 709 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 ENTPD5O75356 428 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 KHDRBS3O75525 346 aaKnown RBP7.38□□□□□ -1.23
UBR1-204ENST00000563239 FARS2O95363 451 aaKnown RBP7.38□□□□□ -1.23
UBR1-204ENST00000563239 SOX14O95416 240 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 RAB36O95755 333 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 GAAP10253 952 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 CCL2P13500 99 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 GSTM3P21266 225 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 MSR1P21757 451 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 NR4A1P22736 598 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 APOBEC3AP31941 199 aaPredicted RBP7.38□□□□□ -1.23
UBR1-204ENST00000563239 THBS4P35443 961 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 PTH2RP49190 550 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 ADAM8P78325 824 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.38□□□□□ -1.23
UBR1-204ENST00000563239 COX10Q12887 443 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 ADIPOQQ15848 244 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 KCNMB1Q16558 191 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 SLC36A2Q495M3 483 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 PABPC1L2AQ5JQF8 200 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 RPL13AP3Q6NVV1 102 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 ZNF544Q6NX49 715 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 TMEM53Q6P2H8 277 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 LEG1Q6P5S2 330 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 SHQ1Q6PI26 577 aaKnown RBP7.38□□□□□ -1.23
UBR1-204ENST00000563239 GLB1L2Q8IW92 636 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 LRRC75A-AS1Q8N1F1 130 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 DEPDC4Q8N2C3 294 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 MUC15Q8N387 334 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 SDR9C7Q8NEX9 313 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 IL17RDQ8NFM7 739 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 OR4F15Q8NGB8 312 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 OR52E2Q8NGJ4 325 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 AKR7LQ8NHP1 331 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 TMEM171Q8WVE6 324 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 NRBF2Q96F24 287 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 TSSK6Q9BXA6 273 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 GSX2Q9BZM3 304 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 OR2H1Q9GZK4 316 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 FN3KQ9H479 309 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 YY1AP1Q9H869 796 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 CA10Q9NS85 328 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 POU2F3Q9UKI9 436 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 B9D1Q9UPM9 204 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 AP4S1Q9Y587 144 aa7.38□□□□□ -1.23
UBR1-204ENST00000563239 ZANQ9Y493 2812 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 FLNAP21333 2647 aaKnown RBP7.37□□□□□ -1.23
UBR1-204ENST00000563239 LOC100509620A0A075B734 347 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 FAM171A2A8MVW0 826 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 H3BNX3 289 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 GPRIN2O60269 458 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 NDUFS7O75251 213 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 DEAF1O75398 565 aaPredicted RBP7.37□□□□□ -1.23
UBR1-204ENST00000563239 E2F6O75461 281 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 TFP02787 698 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 APEX1P27695 318 aaKnown RBP7.37□□□□□ -1.23
UBR1-204ENST00000563239 CDKN1AP38936 164 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 DAPP51397 102 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 ACTR3P61158 418 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 HIST1H3AP68431 136 aa7.37□□□□□ -1.23
UBR1-204ENST00000563239 KPNB1Q14974 876 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms