RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 C11orf40Q8WZ69 217 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 MCHR2Q969V1 340 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 UCN2Q96RP3 112 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 HES7Q9BYE0 225 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 ZCCHC4Q9H5U6 513 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 ABCB9Q9NP78 766 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 UGT2A1Q9Y4X1 527 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 V9GYH0 126 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 KNTC1P50748 2209 aa11.48□□□□□ -0.57
SNX1-211ENST00000560829 A0A0G2JK05 382 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 TRBV5-5A0A0J9YX44 114 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 ZNF879B4DU55 563 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 H0YC42 278 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 EIF1AYO14602 144 aaKnown RBP11.47□□□□□ -0.57
SNX1-211ENST00000560829 TMCC2O75069 709 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 UPK1BO75841 260 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 NCR1O76036 304 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 ZNF432O94892 652 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 GLSO94925 669 aaPredicted RBP11.47□□□□□ -0.57
SNX1-211ENST00000560829 ENPP1P22413 925 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 SUCLG1P53597 346 aaKnown RBP11.47□□□□□ -0.57
SNX1-211ENST00000560829 CLDN15P56746 228 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 CLDN17P56750 224 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 CARD18P57730 90 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 PPP3R1P63098 170 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 RGS21Q2M5E4 152 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 ASCL5Q7RTU5 278 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 KRT77Q7Z794 578 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.47□□□□□ -0.57
SNX1-211ENST00000560829 VASH2Q86V25 355 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 TMEM123Q8N131 208 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 ZIC4Q8N9L1 334 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 CHPT1Q8WUD6 406 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 HAS2Q92819 552 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 TMEM54Q969K7 222 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 OR14A2Q96R54 314 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 TTTY12Q9BZ98 90 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 ZNF552Q9H707 407 aaPredicted RBP11.47□□□□□ -0.57
SNX1-211ENST00000560829 CYB5R1Q9UHQ9 305 aa11.47□□□□□ -0.57
SNX1-211ENST00000560829 IGHV3-15A0A0B4J1V0 119 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 ISPDA4D126 451 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 ANKRD61A6NGH8 418 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 NPIPA2E9PIF3 369 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 NPIPA3F8WFD2 350 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 PIN1P1O15428 100 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 NKX2-8O15522 239 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 POU3F2P20265 443 aaPredicted RBP11.46□□□□□ -0.57
SNX1-211ENST00000560829 RIDAP52758 137 aaKnown RBP11.46□□□□□ -0.57
SNX1-211ENST00000560829 ZNF181Q2M3W8 571 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 Q499Y3 187 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 HSD17B12Q53GQ0 312 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 C10orf128Q5T292 105 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 ABLIM2Q6H8Q1 611 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 SFXN4Q6P4A7 337 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 MZT2AQ6P582 158 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 LRFN4Q6PJG9 635 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 Q6ZNX1 250 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 PRSS35Q8N3Z0 413 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 OR10H5Q8NGA6 315 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 INTS12Q96CB8 462 aaKnown RBP11.46□□□□□ -0.57
SNX1-211ENST00000560829 ZNF385AQ96PM9 386 aaKnown RBP11.46□□□□□ -0.57
SNX1-211ENST00000560829 DERL3Q96Q80 235 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 OR2M2Q96R28 347 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 CCDC32Q9BV29 185 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 COMMD4Q9H0A8 199 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 GLTPQ9NZD2 209 aa11.46□□□□□ -0.57
SNX1-211ENST00000560829 TRABD2BA6NFA1 517 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 ZNF716A6NP11 495 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 KLRC4-KLRK1H3BQV0 150 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 SRSF10O75494 262 aaKnown RBP11.46□□□□□ -0.58
SNX1-211ENST00000560829 WNT11O96014 354 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 QDPRP09417 244 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 RAB3BP20337 219 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 MAPK3P27361 379 aaPredicted RBP11.46□□□□□ -0.58
SNX1-211ENST00000560829 DCTDP32321 178 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 THBS2P35442 1172 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 KIR3DL2P43630 455 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 STARP49675 285 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 WDR38Q5JTN6 314 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 CEP78Q5JTW2 689 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 CARD17Q5XLA6 110 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 ZNF544Q6NX49 715 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 FOXL2NBQ6ZUU3 175 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 RHOUQ7L0Q8 258 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 TMEM251Q8N6I4 163 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 ZFP62Q8NB50 900 aaPredicted RBP11.46□□□□□ -0.58
SNX1-211ENST00000560829 OR10D3Q8NH80 312 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 THRSPQ92748 146 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 CPNE4Q96A23 557 aaPredicted RBP11.46□□□□□ -0.58
SNX1-211ENST00000560829 SCMH1Q96GD3 660 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 SDHCQ99643 169 aaPredicted RBP11.46□□□□□ -0.58
SNX1-211ENST00000560829 NOX4Q9NPH5 578 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 FOXD3Q9UJU5 478 aaPredicted RBP11.46□□□□□ -0.58
SNX1-211ENST00000560829 RCE1Q9Y256 329 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 LRP12Q9Y561 859 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 ZNF292O60281 2723 aa11.46□□□□□ -0.58
SNX1-211ENST00000560829 A0A087WV48 116 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms