RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 NSMAFQ92636 917 aa14.78□□□□□ -0.04
CRTC3-208ENST00000560098 HDAC2Q92769 488 aaKnown RBP14.78□□□□□ -0.04
CRTC3-208ENST00000560098 MARS2Q96GW9 593 aaKnown RBP14.78□□□□□ -0.04
CRTC3-208ENST00000560098 MAGEB18Q96M61 343 aa14.78□□□□□ -0.04
CRTC3-208ENST00000560098 SH3GL1Q99961 368 aa14.78□□□□□ -0.04
CRTC3-208ENST00000560098 RBM4Q9BWF3 364 aaKnown RBP14.78□□□□□ -0.04
CRTC3-208ENST00000560098 LOC100509620A0A075B734 347 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 PLSCR5A0PG75 271 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 FBP2O00757 339 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 SHOX2O60902 331 aaPredicted RBP14.77□□□□□ -0.04
CRTC3-208ENST00000560098 GDI2P50395 445 aaKnown RBP14.77□□□□□ -0.04
CRTC3-208ENST00000560098 PSG4Q00888 419 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 FMODQ06828 376 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 LAPTM4AQ15012 233 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 RABL3Q5HYI8 236 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 TMEM255AQ5JRV8 349 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 FAM27BQ5VT28 67 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 MBNL2Q5VZF2 373 aaKnown RBP14.77□□□□□ -0.04
CRTC3-208ENST00000560098 SLC25A47Q6Q0C1 308 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 CALHM3Q86XJ0 350 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 C1orf174Q8IYL3 243 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 C3orf56Q8N813 242 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 AKR7LQ8NHP1 331 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 NANPQ8TBE9 248 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 SLC25A40Q8TBP6 338 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 KLF14Q8TD94 323 aaPredicted RBP14.77□□□□□ -0.04
CRTC3-208ENST00000560098 ZMYND19Q96E35 227 aaPredicted RBP14.77□□□□□ -0.04
CRTC3-208ENST00000560098 GAL3ST1Q99999 423 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 SUCNR1Q9BXA5 334 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 TXNIPQ9H3M7 391 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 NPHS2Q9NP85 383 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 MED31Q9Y3C7 131 aa14.77□□□□□ -0.04
CRTC3-208ENST00000560098 GMNCA6NCL1 334 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 THRBP10828 461 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 ADRA2CP18825 462 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 GATA3P23771 443 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 OR1E2P47887 323 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 LIMS1P48059 325 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 ERVK-25P63136 954 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 ALG10Q5BKT4 473 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 METTL21CQ5VZV1 264 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 ALDH16A1Q8IZ83 802 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 ECSITQ9BQ95 431 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 SIKE1Q9BRV8 207 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 OR2J1Q9GZK6 312 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 EGLN1Q9GZT9 426 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 CYSLTR2Q9NS75 346 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 HIF3AQ9Y2N7 669 aa14.76□□□□□ -0.05
CRTC3-208ENST00000560098 A0A0G2JND7 137 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ZSCAN5BA6NJL1 495 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 SPRY1O43609 319 aaPredicted RBP14.75□□□□□ -0.05
CRTC3-208ENST00000560098 UBOX5O94941 541 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ADH4P08319 380 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 LIPAP38571 399 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 SLC3A1Q07837 685 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 TOP3AQ13472 1001 aaPredicted RBP14.75□□□□□ -0.05
CRTC3-208ENST00000560098 TAF11Q15544 211 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 RFPL4BQ6ZWI9 263 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 OR8J3Q8NGG0 315 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ABHD4Q8TB40 342 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 SLC6A7Q99884 636 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ALG12Q9BV10 488 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 OR2H1Q9GZK4 316 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 WNT5BQ9H1J7 359 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 C7orf69Q9H7B7 122 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 CGGBP1Q9UFW8 167 aaPredicted RBP14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ISPDA4D126 451 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 H3BSA7 217 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ICMTO60725 284 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 EDF1O60869 148 aaKnown RBP14.75□□□□□ -0.05
CRTC3-208ENST00000560098 IFNA14P01570 189 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 LAP3P28838 519 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 PPP1CBP62140 327 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ERICH5Q6P6B1 374 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 BPIFB2Q8N4F0 458 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 FNDC8Q8TC99 324 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 LRRC58Q96CX6 371 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 RBP7Q96R05 134 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 ZDHHC8Q9ULC8 765 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 TIMM10BQ9Y5J6 103 aa14.75□□□□□ -0.05
CRTC3-208ENST00000560098 HMGB1P1B2RPK0 211 aaPredicted RBP14.74□□□□□ -0.05
CRTC3-208ENST00000560098 FXYD1O00168 92 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 PIP5K1CO60331 668 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 CST2P09228 141 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 GUCA1AP43080 201 aaPredicted RBP14.74□□□□□ -0.05
CRTC3-208ENST00000560098 RPL27P61353 136 aaKnown RBP14.74□□□□□ -0.05
CRTC3-208ENST00000560098 PCBD1P61457 104 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 LCN2P80188 198 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 ZMAT1Q5H9K5 638 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 ZNF771Q7L3S4 317 aaPredicted RBP14.74□□□□□ -0.05
CRTC3-208ENST00000560098 TREML1Q86YW5 311 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 CLDN22Q8N7P3 220 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 SGMS2Q8NHU3 365 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 BPIFA2Q96DR5 249 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 DIRC2Q96SL1 478 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 ELOVL3Q9HB03 270 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 UBAP1Q9NZ09 502 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 OPN4Q9UHM6 478 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 KLHL21Q9UJP4 597 aa14.74□□□□□ -0.05
CRTC3-208ENST00000560098 HTR3EA5X5Y0 456 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms