RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 IFNW1P05000 195 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 HEXAP06865 529 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 CSF3P09919 207 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 CEACAM1P13688 526 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 GYPEP15421 78 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 PVALBP20472 110 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 FPR3P25089 353 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 PAX6P26367 422 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 STOMP27105 288 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 CRABP1P29762 137 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 FOLR3P41439 243 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OR1E2P47887 323 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 RFX3P48380 749 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 RGS6P49758 472 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 RBP2P50120 134 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 NOVA1P51513 510 aaKnown RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 RAB5BP61020 215 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 VLDLRP98155 873 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 NHLH1Q02575 133 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 DGCR6Q14129 220 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF79Q15937 498 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 SMN1Q16637 294 aaKnown RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 FAM74A3Q4VXF1 159 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF311Q5JNZ3 666 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OTUD3Q5T2D3 398 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 DDI2Q5TDH0 399 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 DHRS7BQ6IAN0 325 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 RPL13AP3Q6NVV1 102 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 PAPD4Q6PIY7 484 aaKnown RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 C19orf48Q6RUI8 117 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 TMEM205Q6UW68 189 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 NPSR1Q6W5P4 371 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 DOK3Q7L591 496 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 SLC29A4Q7RTT9 530 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 CPEB2Q7Z5Q1 589 aaKnown RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 TMPRSS12Q86WS5 348 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF619Q8N2I2 560 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 PRR18Q8N4B5 295 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 NANOGP1Q8N7R0 232 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF540Q8NDQ6 660 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 GPR32P1Q8NGA4 272 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OR4N2Q8NGD1 307 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OR1N1Q8NGS0 311 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OR2Y1Q8NGV0 311 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OR52P1PQ8NH57 321 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 OR5K1Q8NHB7 308 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 NR4A3Q92570 626 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 LRRC46Q96FV0 321 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 SFXN2Q96NB2 322 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 GAL3ST4Q96RP7 486 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 LPAR4Q99677 370 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 PINK1Q9BXM7 581 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 SEMA4CQ9C0C4 833 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 MTHFD2LQ9H903 347 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 MYOZ1Q9NP98 299 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 THSD1Q9NS62 852 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 FOXJ2Q9P0K8 574 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 METTL1Q9UBP6 276 aaKnown RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 SLC13A4Q9UKG4 626 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 NDRG4Q9ULP0 352 aaKnown RBP6.32□□□□□ -1.4
ZEB1-216ENST00000559496 CMAHPQ9Y471 501 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 WDFY4Q6ZS81 3184 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 NINQ8N4C6 2090 aa6.32□□□□□ -1.4
ZEB1-216ENST00000559496 C2orf92A0A1B0GVN3 265 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C7orf66A4D0T2 115 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FRG2CA6NGY1 282 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 C5orf52A6NGY3 159 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RFPL4AA6NLU0 287 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 MCIDASD6RGH6 385 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RFPL4AL1F8VTS6 287 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 INMT-MINDY4F8WBC2 141 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SYT5O00445 386 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CHP2O43745 196 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 KRT33AO76009 404 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 DIRAS1O95057 198 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 GADD45GO95257 159 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 FADS2O95864 444 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 IGKV1D-16P01601 117 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 MBP02144 154 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 APOC3P02656 99 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 UMODP07911 640 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 GUSBP08236 651 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 STSP08842 583 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 NMBP08949 121 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RAB40ALP0C0E4 278 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CT45A8P0DMV1 189 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 CT45A9P0DMV2 189 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 APEHP13798 732 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 TCN2P20062 427 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 DRD5P21918 477 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 PIGAP37287 484 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 PPICP45877 212 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 RORCP51449 518 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 ZNF81P51508 661 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 SUCLG1P53597 346 aaKnown RBP6.31□□□□□ -1.4
ZEB1-216ENST00000559496 DCAF7P61962 342 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 IL5RAQ01344 420 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 DHODHQ02127 395 aa6.31□□□□□ -1.4
ZEB1-216ENST00000559496 EBPQ15125 230 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms