RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CD3EP07766 207 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 DANCRP0C864 163 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 CD79AP11912 226 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ZNF35P13682 527 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ZNF23P17027 643 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ZNF32P17041 273 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 CD53P19397 219 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 PTAFRP25105 342 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 PYCR1P32322 319 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 GRK5P34947 590 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 PTDSS1P48651 473 aaKnown RBP9.91□□□□□ -0.82
SNX1-204ENST00000559061 ZNF84P51523 738 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 GINS1Q14691 196 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 RAB39AQ14964 217 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 KCNMB1Q16558 191 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 GSG1Q2KHT4 349 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 LINC01590Q5TEZ4 76 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 SSX8Q7RTT4 187 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 HIPK1Q86Z02 1210 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 SVOPLQ8N434 492 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ATG16L2Q8NAA4 619 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 SLC26A10Q8NG04 563 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 OR2T33Q8NG76 320 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 OR52L1Q8NGH7 329 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 OR9Q1Q8NGQ5 310 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 FNDC8Q8TC99 324 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 C11orf40Q8WZ69 217 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 RBP7Q96R05 134 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 BDH2Q9BUT1 245 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 NDEL1Q9GZM8 345 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 RACGAP1Q9H0H5 632 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 WNT5BQ9H1J7 359 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ESRP2Q9H6T0 727 aaKnown RBP9.91□□□□□ -0.82
SNX1-204ENST00000559061 MED20Q9H944 212 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 PAPOLBQ9NRJ5 636 aaKnown RBP9.91□□□□□ -0.82
SNX1-204ENST00000559061 CMC2Q9NRP2 79 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ST6GALNAC2Q9UJ37 374 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 MOKQ9UQ07 419 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 PLEKHA6Q9Y2H5 1048 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 LHFPL6Q9Y693 200 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 VPS13CQ709C8 3753 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 OTOGQ6ZRI0 2925 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ZNF469Q96JG9 3925 aaPredicted RBP9.9□□□□□ -0.82
SNX1-204ENST00000559061 NOTCH2Q04721 2471 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 LOC100509620A0A075B734 347 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 FAM183AA6NL82 134 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 ZAR1LA6NP61 321 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 EI24O14681 340 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 SURF4O15260 269 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 KHDRBS3O75525 346 aaKnown RBP9.9□□□□□ -0.82
SNX1-204ENST00000559061 UBL3O95164 117 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 CD8AP01732 235 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 ALPLP05186 524 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 GYPBP06028 91 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 SOD3P08294 240 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 CST2P09228 141 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 NPR2P20594 1047 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 MSR1P21757 451 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 ANOS1P23352 680 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 HOXC12P31275 282 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 GGT2P36268 569 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 ARR3P36575 388 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 CAPZA2P47755 286 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 CRISP1P54107 249 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 RAB1AP62820 205 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 NKX6-1P78426 367 aaPredicted RBP9.9□□□□□ -0.82
SNX1-204ENST00000559061 EFNB1P98172 346 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 PSG4Q00888 419 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 NPRL3Q12980 569 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 SGCAQ16586 387 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 TMEM255AQ5JRV8 349 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 TMEM108Q6UXF1 575 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 SLC16A14Q7RTX9 510 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 JAZF1Q86VZ6 243 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 KRTAP1-3Q8IUG1 177 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 CCDC36Q8IYA8 594 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 PQLC1Q8N2U9 271 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 ICA1LQ8NDH6 482 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 BBS1Q8NFJ9 593 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 OR51L1Q8NGJ5 315 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 AKR7LQ8NHP1 331 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 TEX47Q8TBZ9 253 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 PTP4A1Q93096 173 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 SLC29A1Q99808 456 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 GABARAPL3Q9BY60 117 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 UBTD1Q9HAC8 227 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 SRA1Q9HD15 236 aaKnown RBP9.9□□□□□ -0.82
SNX1-204ENST00000559061 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
SNX1-204ENST00000559061 BAIAP2Q9UQB8 552 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 FKBP7Q9Y680 259 aa9.9□□□□□ -0.82
SNX1-204ENST00000559061 PRRC2AP48634 2157 aaKnown RBP9.9□□□□□ -0.83
SNX1-204ENST00000559061 ARFGEF3Q5TH69 2177 aa9.9□□□□□ -0.83
SNX1-204ENST00000559061 H3BN98 237 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 DLGAP1O14490 977 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 SERPINA5P05154 406 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 CCL2P13500 99 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 SPI1P17947 270 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 SLC2A5P22732 501 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 POU1F1P28069 291 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 RPS27P42677 84 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms