RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 DYNC2LI1Q8TCX1 351 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 SPRYD4Q8WW59 207 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 ASB10Q8WXI3 467 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 KLHL15Q96M94 604 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 OXGR1Q96P68 337 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 DCSTAMPQ9H295 470 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 KCNN2Q9H2S1 579 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 KIAA1549Q9HCM3 1950 aa12.66□□□□□ -0.38
TRAPPC6B-206ENST00000556765 OR2M5A3KFT3 312 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 RNF212BA8MTL3 300 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 EFNA2O43921 213 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 ZIC3O60481 467 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 TACSTD2P09758 323 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 CLUP10909 449 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 PAX7P23759 505 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 GBX2P52951 348 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 VBP1P61758 197 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 GLO1Q04760 184 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 SPCS2Q15005 226 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 TMEM176BQ3YBM2 270 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 OR2G6Q5TZ20 316 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 CD200R1LQ6Q8B3 271 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 SLC35D2Q76EJ3 337 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 SHFQ7M4L6 423 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 FAM220AQ7Z4H9 259 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 FGD2Q7Z6J4 655 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 CDC20BQ86Y33 519 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 ASB17Q8WXJ9 295 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 ZMYND19Q96E35 227 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 JSRP1Q96MG2 331 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
TRAPPC6B-206ENST00000556765 CUBNO60494 3623 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TRDV1A0A1B0GX56 115 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 A0A1W2PQL4 384 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SLC22A23A1A5C7 686 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 INAFM1C9JVW0 142 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 KLRC4-KLRK1H3BQV0 150 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SERPINI2O75830 405 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SULT1C4O75897 302 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 NEURL1O76050 574 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 APOL3O95236 402 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SERPINA3P01011 423 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RAF1P04049 648 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 HRGP04196 525 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GYPBP06028 91 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 CD46P15529 392 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF182P17025 639 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 CD96P40200 585 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 DNASE1L1P49184 302 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 POU3F1Q03052 451 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF85Q03923 595 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 EGR3Q06889 387 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OR1C1Q15619 314 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 HYAL4Q2M3T9 481 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TMEM211Q6ICI0 200 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ESPNLQ6ZVH7 1005 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 VASH1Q7L8A9 365 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF227Q86WZ6 799 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 KRTAP1-3Q8IUG1 177 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TIGD4Q8IY51 512 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 OR14L1PQ8NHC6 308 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SNX33Q8WV41 574 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 S100ZQ8WXG8 99 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GNRHR2Q96P88 292 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 INTS14Q96SY0 518 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 CHCHD6Q9BRQ6 235 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 MED18Q9BUE0 208 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 HES7Q9BYE0 225 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SYT4Q9H2B2 425 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 MMP27Q9H306 513 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 WDR76Q9H967 626 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PAQR5Q9NXK6 330 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 SONP18583 2426 aaKnown RBP12.64□□□□□ -0.39
TRAPPC6B-206ENST00000556765 LOC100506127A0A0U1RQW1 187 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 LRRC3CA6NJW4 275 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PLPP2O43688 288 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GPRIN2O60269 458 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 KHDRBS3O75525 346 aaKnown RBP12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 IL1AP01583 271 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 IGHG1P01857 330 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 HPNP05981 417 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TPOP07202 933 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 MRPL3P09001 348 aaKnown RBP12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 ZNF43P17038 809 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 GDF1P27539 372 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 PEX19P40855 299 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 CRYBB2P43320 205 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 TGM4P49221 684 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 AGFG1P52594 562 aaKnown RBP12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 RAC3P60763 192 aa12.63□□□□□ -0.39
TRAPPC6B-206ENST00000556765 NCS1P62166 190 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms