RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MCHR2Q969V1 340 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 POTEKPQ9BYX7 375 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SLITRK2Q9H156 845 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 TP63Q9H3D4 680 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 SLC39A1Q9NY26 324 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 NXT1Q9UKK6 140 aaKnown RBP9.05□□□□□ -0.96
TMEM260-211ENST00000556648 FOXJ3Q9UPW0 622 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 BOLA1Q9Y3E2 137 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 PCSK5Q92824 1860 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 DMDP11532 3685 aa9.05□□□□□ -0.96
TMEM260-211ENST00000556648 A0A1W2PNV4 684 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 ANXA2P2A6NMY6 339 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 HSPB2A8KAH6 182 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 GSTZ1O43708 216 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 KLK3P07288 261 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 ANXA2P07355 339 aaKnown RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CDK2P24941 298 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 GIFP27352 417 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 MSX1P28360 303 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CRABP1P29762 137 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 GDNFP39905 211 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 EIF1AXP47813 144 aaKnown RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 RGS19P49795 217 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 RIDAP52758 137 aaKnown RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 EFNB2P52799 333 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 TRA2AQ13595 282 aaKnown RBP eCLIP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 MFSD13AQ14CX5 517 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 SF3B4Q15427 424 aaKnown RBP eCLIP9.04□□□□□ -0.965e-6■■■■□ 26.7
TMEM260-211ENST00000556648 HSPB2Q16082 182 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CCDC157Q569K6 752 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 TMEM255AQ5JRV8 349 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 TEX30Q5JUR7 227 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 BCL2L15Q5TBC7 163 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CARD17Q5XLA6 110 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 OR52I2Q8NH67 350 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 SMIM4Q8WVI0 70 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 C11orf40Q8WZ69 217 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 PROK2Q9HC23 129 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF160Q9HCG1 818 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 SDHAF3Q9NRP4 125 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 NUDT15Q9NV35 164 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 KLHL13Q9P2N7 655 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 EMC9Q9Y3B6 208 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CACNA1CQ13936 2221 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 MED12Q93074 2177 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 C9J4A7 227 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 TRAF3IP2O43734 574 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 ORC5O43913 435 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 KHDRBS3O75525 346 aaKnown RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF432O94892 652 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF823P16415 610 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 HOXD12P35452 270 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 BLVRAP53004 296 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 PITPNAQ00169 270 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CAMK2DQ13557 499 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 ZNF468Q5VIY5 522 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-211ENST00000556648 C3orf33Q6P1S2 294 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 BAIAP2L2Q6UXY1 529 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 GPAT4Q86UL3 456 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 DTWD2Q8NBA8 298 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 OR11G2Q8NGC1 345 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CREB3L1Q96BA8 519 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 CDCP1Q9H5V8 836 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 PLSCR3Q9NRY6 295 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 MCUBQ9NWR8 336 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 TAS2R4Q9NYW5 299 aa9.04□□□□□ -0.96
TMEM260-211ENST00000556648 FRYLO94915 3013 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 CFAP54Q96N23 3096 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 A0A0A6YYJ9 748 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 CTDSPLO15194 276 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 LDOC1O95751 146 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-211ENST00000556648 CYC1P08574 325 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 CALCBP10092 127 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 CCR9P51686 369 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 CLPPQ16740 277 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-211ENST00000556648 TMEM176BQ3YBM2 270 aaPredicted RBP9.03□□□□□ -0.96
TMEM260-211ENST00000556648 DNM1P34Q6PK57 102 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 OR10S1Q8NGN2 331 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 OR2Y1Q8NGV0 311 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 CMKLR1Q99788 373 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 ARRDC1-AS1Q9H2J1 176 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 EMC7Q9NPA0 242 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 G6PC2Q9NQR9 355 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 RCE1Q9Y256 329 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 B3GALT5Q9Y2C3 310 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 R4GMQ9 66 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 WDFY3Q8IZQ1 3526 aa9.03□□□□□ -0.96
TMEM260-211ENST00000556648 PHF3Q92576 2039 aaKnown RBP9.02□□□□□ -0.97
TMEM260-211ENST00000556648 A0A0G2JMM0 328 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 A0A1W2PPB8 328 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 A0A1W2PPL8 197 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 A0A1W2PRS3 328 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 KIR3DP1A8MWS1 328 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 GMDSO60547 372 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 RAF1P04049 648 aa9.02□□□□□ -0.97
TMEM260-211ENST00000556648 SYPP08247 313 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms