RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RABL6Q3YEC7 729 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 SFT2D3Q587I9 215 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 CCNJQ5T5M9 372 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 LRRC74BQ6ZQY2 392 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 TMEM179Q6ZVK1 233 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 ABHD13Q7L211 337 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 ZSCAN30Q86W11 494 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 OR8U1Q8NH10 309 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 OR5B3Q8NH48 314 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 COQ8AQ8NI60 647 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 LRRC29Q8WV35 223 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 RTN4IP1Q8WWV3 396 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 SHC3Q92529 594 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 TMEM54Q969K7 222 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 SYAP1Q96A49 352 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 PLEKHA8Q96JA3 519 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 MTMR9Q96QG7 549 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 TCHPQ9BT92 498 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 TMEM43Q9BTV4 400 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 SLC25A2Q9BXI2 301 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 ANGPTL4Q9BY76 406 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 VCX2Q9H322 139 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 RANBP3Q9H6Z4 567 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 EDA2RQ9HAV5 297 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 SLC38A10Q9HBR0 1119 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 HMG20AQ9NP66 347 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 SMOXQ9NWM0 555 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 UVRAGQ9P2Y5 699 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 CTSFQ9UBX1 484 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 SLC7A8Q9UHI5 535 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 ADAM28Q9UKQ2 775 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 PIGLQ9Y2B2 252 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 PNPLA6Q8IY17 1366 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 VWA8A3KMH1 1905 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 PRR14LQ5THK1 2151 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 TRAV26-1A0A087WT03 109 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 ZNF816-ZNF321PA0A0X1KG74 233 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 C5orf63A6NC05 138 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 SMCO2A6NFE2 343 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 SPECC1L-ADORA2AF8WAN1 911 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 UBXN8O00124 270 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 PSTPIP1O43586 416 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 TIMM8AO60220 97 aaPredicted RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 UPK3AO75631 287 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 EIF3GO75821 320 aaKnown RBP eCLIP0.79□□□□□ -2.28
SRP54-207ENST00000555535 RHOBTB1O94844 696 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 IL1BP01584 269 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 IGHV2-5P01817 119 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 HLA-DQB1P01920 261 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 HLA-DPB1P04440 258 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 SMIM10L1P0DMW3 83 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 SERPINB5P36952 375 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 HSD17B2P37059 387 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 CEACAM3P40198 252 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 OPRD1P41143 372 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 AIF1P55008 147 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 YWHAGP61981 247 aaKnown RBP eCLIP0.79□□□□□ -2.28
SRP54-207ENST00000555535 OGDHQ02218 1023 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 TNFRSF17Q02223 184 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 TWF1Q12792 350 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 IMMTQ16891 758 aaKnown RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 EXOC3L2Q2M3D2 409 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 METTL21CQ5VZV1 264 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 SPECC1LQ69YQ0 1117 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 ZFP1Q6P2D0 407 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 ARL9Q6T311 187 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 UNQ9165/PRO28630Q6UXU0 137 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 H2AFVQ71UI9 128 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 LHFPL3Q86UP9 236 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 CALHM1Q8IU99 346 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 EID2Q8N6I1 236 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 LRRC52Q8N7C0 313 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 CXorf40AQ8TE69 158 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 EMG1Q92979 244 aaKnown RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 CREB3L1Q96BA8 519 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 SMIM10Q96HG1 83 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 NARS2Q96I59 477 aaKnown RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 CNDP1Q96KN2 507 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 IFT74Q96LB3 600 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 C12orf42Q96LP6 360 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 PSKH2Q96QS6 385 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 OR5B12Q96R08 314 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 CAMK2N2Q96S95 79 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 CNN2Q99439 309 aaKnown RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 P2RX4Q99571 388 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 FAIM2Q9BWQ8 316 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 MRPL37Q9BZE1 423 aaKnown RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 LINC00597Q9H2U6 94 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 AZI2Q9H6S1 392 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 SYNDIG1Q9H7V2 258 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 GORASP2Q9H8Y8 452 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 FN3KRPQ9HA64 309 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 DHCR7Q9UBM7 475 aaKnown RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 TRMT112Q9UI30 125 aaKnown RBP0.79□□□□□ -2.28
SRP54-207ENST00000555535 ST3GAL6Q9Y274 331 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 CDHR2Q9BYE9 1310 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 CNTNAP1P78357 1384 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 PLXNB1O43157 2135 aa0.79□□□□□ -2.28
SRP54-207ENST00000555535 C15orf38-AP3S2A0A0A6YYH1 394 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms