RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PTBP1P26599 531 aaKnown RBP eCLIP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 CEACAM8P31997 349 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 SLC35A1P78382 337 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 SNTB1Q13884 538 aaKnown RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 DDI2Q5TDH0 399 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 OR2G6Q5TZ20 316 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 C22orf42Q6IC83 251 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 OR2A2Q6IF42 318 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 NIPAL3Q6P499 406 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 SMARCD3Q6STE5 483 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 MEPCEQ7L2J0 689 aaKnown RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 TUSC5Q8IXB3 177 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 KDM8Q8N371 416 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF808Q8N4W9 903 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 STK35Q8TDR2 534 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 ASB5Q8WWX0 329 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 GATAD2BQ8WXI9 593 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 BPIFA2Q96DR5 249 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 SDHCQ99643 169 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF649Q9BS31 505 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 NAA11Q9BSU3 229 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF426Q9BUY5 554 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 POTEKPQ9BYX7 375 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 OPN3Q9H1Y3 402 aaPredicted RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 RNF122Q9H9V4 155 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 HINT3Q9NQE9 182 aaKnown RBP8.76□□□□□ -1.01
PSEN1-213ENST00000555386 CMC2Q9NRP2 79 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 V9GYH0 126 aa8.76□□□□□ -1.01
PSEN1-213ENST00000555386 HECTD1Q9ULT8 2610 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 CLEC18AA5D8T8 446 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 PRSS44E7EML9 344 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 RGS5O15539 181 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 PTP4A3O75365 173 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 CLDN14O95500 239 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 CH25HO95992 272 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 MAKP20794 623 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 FKBP2P26885 142 aaKnown RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 COL8A1P27658 744 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 GRPRP30550 384 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 OPRM1P35372 400 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 ATP6V1E1P36543 226 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 KIR2DL2P43627 348 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 RPS25P62851 125 aaKnown RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 TRAM1Q15629 374 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 HIST2H2BCQ6DN03 193 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 TMEM225Q6GV28 225 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 XKRXQ6PP77 449 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF322Q6U7Q0 402 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 METAP1DQ6UB28 335 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 CLEC18BQ6UXF7 455 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 CPOQ8IVL8 374 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 ACBD7Q8N6N7 88 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 ARIH2OSQ8N7S6 290 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 GDPD1Q8N9F7 314 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 RELL2Q8NC24 303 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 CLEC18CQ8NCF0 446 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 LILRB4Q8NHJ6 448 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF417Q8TAU3 575 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 RNF128Q8TEB7 428 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 FAM210AQ96ND0 272 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 MOGAT1Q96PD6 335 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF587Q96SQ5 575 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 PTDSS2Q9BVG9 487 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 C12orf10Q9HB07 376 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 KCNJ16Q9NPI9 418 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 POLE4Q9NR33 117 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 HAO2Q9NYQ3 351 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 NPAP1Q9NZP6 1156 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 PLEKHB1Q9UF11 243 aaPredicted RBP8.75□□□□□ -1.01
PSEN1-213ENST00000555386 SIGLEC7Q9Y286 467 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 EMC9Q9Y3B6 208 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 GRIP1Q9Y3R0 1128 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 PRR14LQ5THK1 2151 aa8.75□□□□□ -1.01
PSEN1-213ENST00000555386 WIPF3A6NGB9 483 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 RIIAD1A6NNX1 92 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 C11orf98E9PRG8 122 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 CYTIPO60759 359 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 NPIPB7O75200 414 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 TNFSF13O75888 250 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 CLDN1O95832 211 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 IGHV3-9P01782 118 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 FUT1P19526 365 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
PSEN1-213ENST00000555386 AGTR1P30556 359 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 UQCRC1P31930 480 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 SDC2P34741 201 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 MAP2K6P52564 334 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 FXYD6P3P58550 94 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 TAS2R43P59537 309 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 PPP3R1P63098 170 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 FABP5Q01469 135 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 LTBQ06643 244 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 POU4F2Q12837 409 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 HNRNPA0Q13151 305 aaKnown RBP8.74□□□□□ -1.01
PSEN1-213ENST00000555386 RNPS1Q15287 305 aaKnown RBP8.74□□□□□ -1.01
PSEN1-213ENST00000555386 FAM69AQ5T7M9 428 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 LINC00114Q6XXX2 140 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 FAM214BQ7L5A3 538 aa8.74□□□□□ -1.01
PSEN1-213ENST00000555386 NUFIP2Q7Z417 695 aaKnown RBP8.74□□□□□ -1.01
PSEN1-213ENST00000555386 LHFPL3Q86UP9 236 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms