RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 YAP1P46937 504 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 OR3A4PP47883 348 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 CRISP1P54107 249 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 OR2B6P58173 313 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 RND3P61587 244 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 RPL32P62910 135 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 SLAMF1Q13291 335 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 OXA1LQ15070 435 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 SF3A2Q15428 464 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 UFSP1Q6NVU6 142 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 FAM199XQ6PEV8 388 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 PLEKHG7Q6ZR37 379 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 MOB1BQ7L9L4 216 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 LRRC6Q86X45 466 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 CEND1Q8N111 149 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 LIX1Q8N485 282 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 TCTEX1D2Q8WW35 142 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ACOT11Q8WXI4 607 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF414Q96IQ9 312 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 C7orf50Q9BRJ6 194 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ULBP2Q9BZM5 246 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF385DQ9H6B1 395 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF702PQ9H963 129 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 BEX1Q9HBH7 125 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 SLC38A10Q9HBR0 1119 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 RETNQ9HD89 108 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 THUMPD1Q9NXG2 353 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 TMEM9Q9P0T7 183 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 ERVW-1Q9UQF0 538 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 YARS2Q9Y2Z4 477 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 URGCP-MRPS24S4R325 110 aa3.55□□□□□ -1.84
SCFD1-211ENST00000554437 PRRC2AP48634 2157 aaKnown RBP3.55□□□□□ -1.84
SCFD1-211ENST00000554437 LRPPRCP42704 1394 aaKnown RBP3.54□□□□□ -1.84
SCFD1-211ENST00000554437 PLEKHH1Q9ULM0 1364 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 ADGRA3Q8IWK6 1321 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 VSTM2BA6NLU5 285 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 E9PLD3 99 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 H0Y9J4 135 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 RAD51BO15315 384 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 COCHO43405 550 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 SNAI2O43623 268 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 ERLIN2O94905 339 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 CD160O95971 181 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 HSPB1P04792 205 aaKnown RBP3.54□□□□□ -1.84
SCFD1-211ENST00000554437 KLK1P06870 262 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 PSMC3P17980 439 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 PSMB1P20618 241 aaKnown RBP3.54□□□□□ -1.84
SCFD1-211ENST00000554437 SYT1P21579 422 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 UGT2B10P36537 528 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 ATP6V0D1P61421 351 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 RPS15AP62244 130 aaKnown RBP3.54□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF154Q13106 437 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 KCNJ11Q14654 390 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 GABRA6Q16445 453 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 TNXAQ16473 311 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 RPEL1Q2QD12 228 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 C5orf47Q569G3 176 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 CARD16Q5EG05 197 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 CDKL4Q5MAI5 379 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 FAM120AOSQ5T036 256 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 TPRG1LQ5T0D9 272 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 TIGD3Q6B0B8 471 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 OR2W3Q7Z3T1 314 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 ZNF546Q86UE3 836 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 SNX31Q8N9S9 440 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 OR2L5Q8NG80 312 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 OR1S2Q8NGQ3 325 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 OR9A4Q8NGU2 314 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 OR6N2Q8NGY6 317 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 CDC26Q8NHZ8 85 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 LINC01006Q8NI28 216 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 UBA3Q8TBC4 463 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 LGALS14Q8TCE9 139 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 CHMP6Q96FZ7 201 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 CYYR1Q96J86 154 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 CELF6Q96J87 481 aaKnown RBP3.54□□□□□ -1.84
SCFD1-211ENST00000554437 OSBPL10Q9BXB5 764 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 SHCBP1LQ9BZQ2 653 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 NMUR2Q9GZQ4 415 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 DEFB129Q9H1M3 183 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 PPDPFQ9H3Y8 114 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 C1orf198Q9H425 327 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 SCML1Q9UN30 329 aa3.54□□□□□ -1.84
SCFD1-211ENST00000554437 A0A0A6YYH2 397 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 A6NJ64 397 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 SAGE2PA6NJ88 616 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 SLC22A20A6NK97 555 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 GFYI3L273 518 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CDX4O14627 284 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 SULT1B1O43704 296 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 SC5DO75845 299 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 C2P06681 752 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CTRB1P17538 263 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 IVDP26440 423 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 AQP2P41181 271 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 NBL1P41271 181 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 CDC34P49427 236 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-211ENST00000554437 EMP2P54851 167 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 DIO3P55073 304 aa3.53□□□□□ -1.84
SCFD1-211ENST00000554437 FBXW4P57775 412 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms