RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 TSPAN31Q12999 210 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 KRR1Q13601 381 aaKnown RBP7.09□□□□□ -1.27
RDH11-205ENST00000553816 SGCAQ16586 387 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 FAM98BQ52LJ0 330 aaKnown RBP7.09□□□□□ -1.27
RDH11-205ENST00000553816 Q5PR19 223 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 THEM4Q5T1C6 240 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 C1QTNF12Q5T7M4 302 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 KRT80Q6KB66 452 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 VHLLQ6RSH7 139 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 SMARCD3Q6STE5 483 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 UGT2A3Q6UWM9 527 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 ZNF620Q6ZNG0 422 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 FOXL2NBQ6ZUU3 175 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 HDDC2Q7Z4H3 204 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 SPATA24Q86W54 205 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 TGIF2LYQ8IUE0 185 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 CCDC36Q8IYA8 594 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 HS3ST5Q8IZT8 346 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 LRRC75A-AS1Q8N1F1 130 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 MUC15Q8N387 334 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 PAQR4Q8N4S7 273 aaPredicted RBP7.09□□□□□ -1.27
RDH11-205ENST00000553816 CPEB3Q8NE35 698 aaKnown RBP7.09□□□□□ -1.27
RDH11-205ENST00000553816 OR8D4Q8NGM9 314 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 FANK1Q8TC84 345 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 GNPDA2Q8TDQ7 276 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 TSSK2Q96PF2 358 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 ERMAPQ96PL5 475 aaPredicted RBP7.09□□□□□ -1.27
RDH11-205ENST00000553816 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 TRIM15Q9C019 465 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 SYT4Q9H2B2 425 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 EGLN3Q9H6Z9 239 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 SMURF2Q9HAU4 748 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 CA10Q9NS85 328 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 CBLN4Q9NTU7 201 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 TMCC3Q9ULS5 477 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 EDARQ9UNE0 448 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 SAMHD1Q9Y3Z3 626 aaKnown RBP7.09□□□□□ -1.27
RDH11-205ENST00000553816 NOTCH2Q04721 2471 aa7.09□□□□□ -1.27
RDH11-205ENST00000553816 YLPM1P49750 1951 aaKnown RBP7.09□□□□□ -1.27
RDH11-205ENST00000553816 A0A1W2PPL8 197 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 TMEM129A0AVI4 362 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 A6NIZ1 184 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 GPRIN2O60269 458 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 CCNB2O95067 398 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 MPZL1O95297 269 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 RAB36O95755 333 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 TXNDC12O95881 172 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 CST1P01037 141 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 IGHV4-39P01824 125 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 HIST1H1CP16403 213 aaKnown RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 ZNF32P17041 273 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 APEX1P27695 318 aaKnown RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 APOBEC3AP31941 199 aaPredicted RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 THBS4P35443 961 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 RAP1BP61224 184 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 RAP1AP62834 184 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 ENDOGQ14249 297 aaKnown RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 ADIPOQQ15848 244 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 MICAQ29983 383 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 CLEC12AQ5QGZ9 265 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 AGAP6Q5VW22 663 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 FAM205BPQ63HN1 556 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 DPY19L2P2Q6ZN68 376 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 SLC16A14Q7RTX9 510 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 YTHDF3Q7Z739 585 aaKnown RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 FBXL14Q8N1E6 418 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 CIARTQ8N365 385 aaPredicted RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 AQP11Q8NBQ7 271 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 OR4K13Q8NH42 304 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 AKR7LQ8NHP1 331 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 UTP4Q969X6 686 aaKnown RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 Q96MF0 132 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 RBP7Q96R05 134 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 NIPSNAP1Q9BPW8 284 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 CACNG6Q9BXT2 260 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 NUAK2Q9H093 628 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 FN3KQ9H479 309 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 CXorf56Q9H5V9 222 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 DENND2DQ9H6A0 471 aaPredicted RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 REEP1Q9H902 201 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 RNF121Q9H920 327 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 SIAEQ9HAT2 523 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 EMC7Q9NPA0 242 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 VSX1Q9NZR4 365 aaPredicted RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 STX18Q9P2W9 335 aaKnown RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 COA3Q9Y2R0 106 aaPredicted RBP7.08□□□□□ -1.28
RDH11-205ENST00000553816 PLCE1Q9P212 2302 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 USF3Q68DE3 2245 aa7.08□□□□□ -1.28
RDH11-205ENST00000553816 CREBBPQ92793 2442 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 RTTNQ86VV8 2226 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 OR6C68A6NDL8 312 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 TRIM64A6NGJ6 449 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 TRIM64BA6NI03 449 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 BHLHE40O14503 412 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 XKRYO14609 159 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 ARPC3O15145 178 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 FKBP6O75344 327 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 TIPRLO75663 272 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 ATP5HO75947 161 aa7.07□□□□□ -1.28
RDH11-205ENST00000553816 LY6HO94772 140 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms