RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SPRNQ5BIV9 151 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 PIWIL3Q7Z3Z3 882 aaKnown RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 NET1Q7Z628 596 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 SLC22A24Q8N4F4 322 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 LSMEM1Q8N8F7 131 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 UBLCP1Q8WVY7 318 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 IPCEF1Q8WWN9 437 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 TMEM54Q969K7 222 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 VPS33AQ96AX1 596 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 TMIGD2Q96BF3 282 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 SORT1Q99523 831 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 C20orf27Q9GZN8 174 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 MMP27Q9H306 513 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 TMEM38BQ9NVV0 291 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 AIG1Q9NVV5 245 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 UBAP1Q9NZ09 502 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 HAO1Q9UJM8 370 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 INSIG2Q9Y5U4 225 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 SOX21Q9Y651 276 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-219ENST00000553488 AUP1Q9Y679 476 aa6.12□□□□□ -1.43
ATXN3-219ENST00000553488 A0A0B4J2E0 115 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 A0A0G2JPF8 293 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 MDFIC2A0A1B0GVS7 189 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 A0A1B0GX12 115 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 ISPDA4D126 451 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 HNRNPCL2B2RXH8 293 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 HNRNPCL3B7ZW38 293 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 LRRN3E7EW58 273 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 TYROBPO43914 113 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 HNRNPCL1O60812 293 aaKnown RBP6.11□□□□□ -1.43
ATXN3-219ENST00000553488 KRT75O95678 551 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 PLATP00750 562 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 KNG1P01042 644 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 LCKP06239 509 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 MMP7P09237 267 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-219ENST00000553488 HNRNPCL4P0DMR1 293 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 NQO1P15559 274 aaKnown RBP6.11□□□□□ -1.43
ATXN3-219ENST00000553488 LBPP18428 481 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 OMGP23515 440 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 RBMXP38159 391 aaKnown RBP6.11□□□□□ -1.43
ATXN3-219ENST00000553488 MPV17P39210 176 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF81P51508 661 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 UCP2P55851 309 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 NME5P56597 212 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 SELENOVP59797 346 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 KRTAP10-3P60369 221 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 GUCY1A3Q02108 690 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 PAX2Q02962 417 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 LRRC74AQ0VAA2 488 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF621Q6ZSS3 439 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 PXKQ7Z7A4 578 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 SNX32Q86XE0 403 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 ZNF101Q8IZC7 436 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 PARP8Q8N3A8 854 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 GLB1L3Q8NCI6 653 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-219ENST00000553488 OR6N1Q8NGY5 312 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 ST7LQ8TDW4 575 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 C11orf40Q8WZ69 217 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 CCL17Q92583 94 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 PKNOX2Q96KN3 472 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 OR52E6Q96RD3 313 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 SH3GL3Q99963 347 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 BCL2L14Q9BZR8 327 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 C1orf198Q9H425 327 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 MEAF6Q9HAF1 191 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 CDH20Q9HBT6 801 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 SMURF1Q9HCE7 757 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 BCL2L10Q9HD36 194 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 DECR2Q9NUI1 292 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 MRPL39Q9NYK5 338 aaKnown RBP6.11□□□□□ -1.43
ATXN3-219ENST00000553488 GLTPQ9NZD2 209 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 LGALS13Q9UHV8 139 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 IFT52Q9Y366 437 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 GPR45Q9Y5Y3 372 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 NPTNQ9Y639 398 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 RYR2Q92736 4967 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
ATXN3-219ENST00000553488 TET2Q6N021 2002 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PLPP3O14495 311 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 SDHDO14521 159 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 RFXANKO14593 260 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 DHHO43323 396 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 SERPINI2O75830 405 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 MT-ND5P03915 603 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 CD55P08174 381 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 MYZAPP0CAP1 466 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 ZCCHC18P0CG32 403 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PGA4P0DJD7 388 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PGA3P0DJD8 388 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PPIAL4GP0DN37 164 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 HOXB9P17482 250 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PRKAR1BP31321 381 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 WNT5AP41221 380 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 CRATP43155 626 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 SLC6A9P48067 706 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 BIDP55957 195 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 PAX8Q06710 450 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 SLC3A1Q07837 685 aa6.1□□□□□ -1.43
ATXN3-219ENST00000553488 TBC1D28Q2M2D7 210 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms