RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 OR14I1A6ND48 311 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 FADS1O60427 444 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 UPK3AO75631 287 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 PLGP00747 810 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CTSBP07858 339 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 HPGDP15428 266 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 RPA2P15927 270 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CBR1P16152 277 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 MGMTP16455 207 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CD34P28906 385 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 MAP3K8P41279 467 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 GPR143P51810 404 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CAPZA1P52907 286 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 GGTLC2Q14390 218 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 ALG10Q5BKT4 473 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 LINC01590Q5TEZ4 76 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 OR2W3Q7Z3T1 314 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CCDC107Q8WV48 283 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 DNTTIP1Q9H147 329 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 GRHPRQ9UBQ7 328 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 FBXL21Q9UKT6 434 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 PCDHB10Q9UN67 800 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 FANCMQ8IYD8 2048 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 SLC25A12O75746 678 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 UBBP0CG47 229 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 UBCP0CG48 685 aaKnown RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 SRFP11831 508 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 PVALBP20472 110 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CALCRP30988 508 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 RPS27AP62979 156 aaKnown RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 UBA52P62987 128 aaKnown RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 GPR18Q14330 331 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 GUCA2BQ16661 112 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 PTCRAQ6ISU1 281 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 ANKRD16Q6P6B7 361 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 BIVMQ86UB2 503 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 RCBTB1Q8NDN9 531 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 ZNF417Q8TAU3 575 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 PAQR8Q8TEZ7 354 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 PPP1R1CQ8WVI7 109 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CPNE2Q96FN4 548 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CDX2Q99626 313 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-230ENST00000552960 CMKLR1Q99788 373 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 MFRPQ9BY79 579 aa11.18□□□□□ -0.62
HDAC7-230ENST00000552960 GPR89AB7ZAQ6 455 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 HCRTR1O43613 425 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 AKR7A3O95154 331 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 CYB5AP00167 134 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 DCNP07585 359 aaKnown RBP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 GPR89BP0CG08 455 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 RBM34P42696 430 aaKnown RBP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 ATP1B3P54709 279 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 SERTAD2Q14140 314 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 RAB11BQ15907 218 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 ZNF550Q7Z398 422 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 JAGN1Q8N5M9 183 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 OR9A4Q8NGU2 314 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 AMELYQ99218 206 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 POTEKPQ9BYX7 375 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 RASL12Q9NYN1 266 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 KCNG2Q9UJ96 466 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 EML5Q05BV3 1969 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 KIF26BQ2KJY2 2108 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 CACNA1EQ15878 2313 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 F8W036 122 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 CDC40O60508 579 aaKnown RBP eCLIP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 AVPR2P30518 371 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 LSSP48449 732 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 BLOC1S1P78537 153 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 DHRS2Q13268 280 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 SMAD2Q15796 467 aaKnown RBP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 C3orf33Q6P1S2 294 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 SLC16A9Q7RTY1 509 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 MCATQ8IVS2 390 aaKnown RBP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 BPIFB2Q8N4F0 458 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 METTL27Q8N6F8 245 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 PHOSPHO1Q8TCT1 267 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 CMSS1Q9BQ75 279 aaKnown RBP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 UPB1Q9UBR1 384 aa11.17□□□□□ -0.62
HDAC7-230ENST00000552960 GPN3Q9UHW5 284 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-230ENST00000552960 A6NCN8 305 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SIGLEC6O43699 453 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 SNAPC5O75971 98 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 AK1P00568 194 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ZNF806P0C7X5 589 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 THEGLP0DJG4 465 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 BDKRB2P30411 391 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 AGTR1P30556 359 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ADAM8P78325 824 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 FGL1Q08830 312 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 LY6G6FQ5SQ64 297 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 FAM219AQ8IW50 185 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 NANPQ8TBE9 248 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 ZFYVE21Q9BQ24 234 aa11.16□□□□□ -0.62
HDAC7-230ENST00000552960 UTP23Q9BRU9 249 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms