RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 TMED7-TICAM2A0A0A6YYA0 188 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 ANKRD33BA6NCL7 494 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 TUBAL3A6NHL2 446 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 OGG1O15527 345 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 UPK1BO75841 260 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 RGS9O75916 674 aaPredicted RBP10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 OR6A2O95222 327 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 GOSR1O95249 250 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 NUDT14O95848 222 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 CRABP1P29762 137 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 SDC2P34741 201 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 RPS19P39019 145 aaKnown RBP10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 SLC16A1P53985 500 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 EGR4Q05215 589 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 EGR3Q06889 387 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 QPRTQ15274 297 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 CDONQ4KMG0 1287 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 OR2G6Q5TZ20 316 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 ZNF544Q6NX49 715 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 VASH1Q7L8A9 365 aaPredicted RBP10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 SLC16A9Q7RTY1 509 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 MARCH3Q86UD3 253 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 CCDC190Q86UF4 302 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 IGFN1Q86VF2 1251 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 ZNF227Q86WZ6 799 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 LRRC75AQ8NAA5 344 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 MAPK1IP1LQ8NDC0 245 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 ADPRHL1Q8NDY3 354 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 OR10H4Q8NGA5 316 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 SPRYD4Q8WW59 207 aaPredicted RBP10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 ASB17Q8WXJ9 295 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 HGDQ93099 445 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 OTULINQ96BN8 352 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 CMTM3Q96MX0 182 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 KATNB1Q9BVA0 655 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 YARS2Q9Y2Z4 477 aaKnown RBP10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 TMED7Q9Y3B3 224 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 FKBP7Q9Y680 259 aa10.66□□□□□ -0.7
RBFOX1-214ENST00000552089 TRAV1-2A0A0B4J238 106 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 MCIDASD6RGH6 385 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 BLOC1S5-TXNDC5H3BN57 136 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 RNF13O43567 381 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 NME2P1O60361 137 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 NEURL1O76050 574 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 SLC2A10O95528 541 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 PTTG1O95997 202 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 ADRA2AP08913 450 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 NR2C1P13056 603 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 SPI1P17947 270 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 NME2P22392 152 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 RFC3P40938 356 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 DAP3P51398 398 aaKnown RBP10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 PSMD7P51665 324 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 CTXN1P60606 82 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 PPP3R1P63098 170 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 OXA1LQ15070 435 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 TRIM16LQ309B1 348 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 C1orf140Q5VVS0 124 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 DNM1P34Q6PK57 102 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 ADGRG3Q86Y34 549 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 GDPD1Q8N9F7 314 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 OR5M9Q8NGP3 310 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 NEIL3Q8TAT5 605 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 DUSP19Q8WTR2 217 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 SNX33Q8WV41 574 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 RNASE6Q93091 150 aaKnown RBP10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 SGCZQ96LD1 299 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 RASL10BQ96S79 203 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 TXNIPQ9H3M7 391 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 MARCH7Q9H992 704 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 FAIMQ9NVQ4 179 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 CDC42EP3Q9UKI2 254 aa10.65□□□□□ -0.7
RBFOX1-214ENST00000552089 PHF3Q92576 2039 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 RYR3Q15413 4870 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 LOC102725191A0A1B0GVB3 256 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 FAM183AA6NL82 134 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 SUSD5O60279 629 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 PFDN1O60925 122 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 TPPPO94811 219 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 APOA1P02647 267 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 BGLAPP02818 100 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 BMP4P12644 408 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 MAPK3P27361 379 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 ZNF41P51814 821 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 SIRPAP78324 504 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 RPL18Q07020 188 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 GLYR1Q49A26 553 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 DMKNQ6E0U4 476 aaPredicted RBP10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 MDGA2Q7Z553 956 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 ZBTB46Q86UZ6 589 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 MEX3DQ86XN8 651 aaKnown RBP10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 TMEM156Q8N614 296 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 BBS1Q8NFJ9 593 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 OR4K13Q8NH42 304 aa10.64□□□□□ -0.71
RBFOX1-214ENST00000552089 ZBTB8AQ96BR9 441 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms