RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 GLTPQ9NZD2 209 aa11.19□□□□□ -0.62
CACNB3-217ENST00000550483 COPS3Q9UNS2 423 aa11.19□□□□□ -0.62
CACNB3-217ENST00000550483 COA3Q9Y2R0 106 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-217ENST00000550483 TEX15Q9BXT5 2789 aa11.19□□□□□ -0.62
CACNB3-217ENST00000550483 A0A087WV48 116 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 TRGV5A0A0B4J1U4 118 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 TVP23AA6NH52 213 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 FAM166BA8MTA8 275 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 FAM171A2A8MVW0 826 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 ZNF814B7Z6K7 855 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 ARL6IP5O75915 188 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 LALBAP00709 142 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 IGHG3P01860 377 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 SPARCP09486 303 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 FCGR2AP12318 317 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CPN1P15169 458 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 MAPK3P27361 379 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 DCTDP32321 178 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CD79BP40259 229 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 RORCP51449 518 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 ZNF84P51523 738 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CCR9P51686 369 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 UCNP55089 124 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CLDN15P56746 228 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CLDN18P56856 261 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 LSM6P62312 80 aaKnown RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 RPS25P62851 125 aaKnown RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 ROR2Q01974 943 aaKnown RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CAMK2DQ13557 499 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 RNPS1Q15287 305 aaKnown RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 ZNF404Q494X3 552 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 TP53I3Q53FA7 332 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 YIF1BQ5BJH7 314 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 RIPPLY2Q5TAB7 128 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 SLC25A47Q6Q0C1 308 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 FCRLAQ7L513 359 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 SSX6Q7RTT6 188 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 DPY19L4Q7Z388 723 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 YIPF7Q8N8F6 280 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 TEX19Q8NA77 164 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 SYT14Q8NB59 555 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 OR6N1Q8NGY5 312 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 OR52N5Q8NH56 324 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 AP3S1Q92572 193 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 OR2M2Q96R28 347 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CDADC1Q9BWV3 514 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 HES7Q9BYE0 225 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 SRXN1Q9BYN0 137 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 NIPAL2Q9H841 368 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 PARPBPQ9NWS1 579 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 MRPL22Q9NWU5 206 aaKnown RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 CRNNQ9UBG3 495 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-217ENST00000550483 ST6GALNAC2Q9UJ37 374 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 IKZF2Q9UKS7 526 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 FLVCR1Q9Y5Y0 555 aa11.18□□□□□ -0.62
CACNB3-217ENST00000550483 MPDZO75970 2070 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 A0A075B6Q4 140 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 TRBV2A0A0J9YWF9 115 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 TMEM212A6NML5 194 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 TFECO14948 347 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 ATXN7O15265 892 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 RRP8O43159 456 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 ABHD16AO95870 558 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 ZNF24P17028 368 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 NPR2P20594 1047 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 MYL9P24844 172 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 EDNRAP25101 427 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 MTNR1BP49286 362 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 GDI2P50395 445 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 RIDAP52758 137 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 SRSF6Q13247 344 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 DOC2BQ14184 412 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 EIF2B1Q14232 305 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 NRN1LQ496H8 165 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 RPUSD3Q6P087 351 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 ARL9Q6T311 187 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 FOXL2NBQ6ZUU3 175 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 TPRA1Q86W33 373 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 C20orf196Q8IYI0 205 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 UBQLNLQ8IYU4 475 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 TMEM123Q8N131 208 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 RNF128Q8TEB7 428 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 THEM6Q8WUY1 208 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 MCHR2Q969V1 340 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 PGLYRP3Q96LB9 341 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 EMC6Q9BV81 110 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 TMED9Q9BVK6 235 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 WDR12Q9GZL7 423 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 SLIRPQ9GZT3 109 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 NXF2Q9GZY0 626 aaKnown RBP11.17□□□□□ -0.62
CACNB3-217ENST00000550483 COMMD4Q9H0A8 199 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 LDAHQ9H6V9 325 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 EXO5Q9H790 373 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 ACOXLQ9NUZ1 547 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 GALNT8Q9NY28 637 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 ZNF175Q9Y473 711 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 PEX16Q9Y5Y5 336 aa11.17□□□□□ -0.62
CACNB3-217ENST00000550483 ZNF716A6NP11 495 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms