RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 STX18Q9P2W9 335 aaKnown RBP11.38□□□□□ -0.59
CPSF6-204ENST00000547486 CACNG2Q9Y698 323 aa11.38□□□□□ -0.59
CPSF6-204ENST00000547486 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.37□□□□□ -0.594e-73■■■□□ 16.2
CPSF6-204ENST00000547486 A0A087WUU8 490 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 C5orf49A4QMS7 147 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 CXCR6O00574 342 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 NME4O00746 187 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 SLC22A2O15244 555 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 PRSS23O95084 383 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF682O95780 498 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 NGFP01138 241 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 IGHV3-13P01766 116 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 GAAP10253 952 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 COX4I1P13073 169 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 MPV17P39210 176 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 CRYBB2P43320 205 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 TRAM2Q15035 370 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 TAF11Q15544 211 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 TSTQ16762 297 aaKnown RBP11.37□□□□□ -0.59
CPSF6-204ENST00000547486 THEM4Q5T1C6 240 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 UGT2A3Q6UWM9 527 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 RINLQ6ZS11 566 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 FOXL2NBQ6ZUU3 175 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 OFCC1Q8IZS5 231 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 OR13C2Q8NGS9 318 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 LZICQ8WZA0 190 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 MARS2Q96GW9 593 aaKnown RBP11.37□□□□□ -0.59
CPSF6-204ENST00000547486 RBP7Q96R05 134 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF416Q9BWM5 594 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 OR2H1Q9GZK4 316 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 HIF1ANQ9NWT6 349 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 NKIRAS2Q9NYR9 191 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 GPR160Q9UJ42 338 aa11.37□□□□□ -0.59
CPSF6-204ENST00000547486 HTR3EA5X5Y0 456 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 EFCAB9A8MZ26 197 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 H7C1C5 153 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 CDC42EP2O14613 210 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 IFNW1P05000 195 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 MSMBP08118 114 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 CST2P09228 141 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 SRP14P37108 136 aaKnown RBP11.36□□□□□ -0.59
CPSF6-204ENST00000547486 GDI2P50395 445 aaKnown RBP11.36□□□□□ -0.59
CPSF6-204ENST00000547486 MMP15P51511 669 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 SLC7A2P52569 658 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 LCN6P62502 163 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 MVKQ03426 396 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 HNRNPA0Q13151 305 aaKnown RBP11.36□□□□□ -0.59
CPSF6-204ENST00000547486 ENDOGQ14249 297 aaKnown RBP11.36□□□□□ -0.59
CPSF6-204ENST00000547486 PCGF3Q3KNV8 242 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF774Q6NX45 483 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 CBLL1Q75N03 491 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 OAFQ86UD1 273 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 TREML1Q86YW5 311 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 TMEM186Q96B77 213 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 TIMM10BQ9Y5J6 103 aa11.36□□□□□ -0.59
CPSF6-204ENST00000547486 IGHV1-69-2A0A0G2JMI3 117 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 SPRY3O43610 288 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 SERPINA1P01009 418 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 TFP02787 698 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 NCK1P16333 377 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 DRD4P21917 467 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 IFNA8P32881 189 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 GSK3BP49841 420 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF718Q3SXZ3 478 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 IFI44LQ53G44 452 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 SPRNQ5BIV9 151 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 RFPL4BQ6ZWI9 263 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 TMPRSS11FQ6ZWK6 438 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 MBOAT2Q6ZWT7 520 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 USP51Q70EK9 711 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 FKBP9P1Q75LS8 142 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 ARPINQ7Z6K5 226 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 RNF113BQ8IZP6 322 aaKnown RBP11.35□□□□□ -0.59
CPSF6-204ENST00000547486 RFLNBQ8N5W9 214 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 KLF14Q8TD94 323 aaPredicted RBP11.35□□□□□ -0.59
CPSF6-204ENST00000547486 SNX33Q8WV41 574 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 IPCEF1Q8WWN9 437 aaPredicted RBP11.35□□□□□ -0.59
CPSF6-204ENST00000547486 GEMIN6Q8WXD5 167 aaKnown RBP11.35□□□□□ -0.59
CPSF6-204ENST00000547486 ACOT11Q8WXI4 607 aaPredicted RBP11.35□□□□□ -0.59
CPSF6-204ENST00000547486 HSH2DQ96JZ2 352 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 LRRC37BQ96QE4 947 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 HOPXQ9BPY8 73 aaPredicted RBP11.35□□□□□ -0.59
CPSF6-204ENST00000547486 OR2J1Q9GZK6 312 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 DECR2Q9NUI1 292 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 EIF3KQ9UBQ5 218 aaKnown RBP11.35□□□□□ -0.59
CPSF6-204ENST00000547486 KLHL21Q9UJP4 597 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 AP3M1Q9Y2T2 418 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 ADAM18Q9Y3Q7 739 aa11.35□□□□□ -0.59
CPSF6-204ENST00000547486 A0A1W2PPL8 197 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 A6NIZ1 184 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 ZSCAN5BA6NJL1 495 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 GSTA4O15217 222 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 TPD52L2O43399 206 aaKnown RBP11.34□□□□□ -0.59
CPSF6-204ENST00000547486 TCF21O43680 179 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 PTP4A3O75365 173 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 AVPP01185 164 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms