RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 GNPDA2Q8TDQ7 276 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 LRGUKQ96M69 825 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 SNX18Q96RF0 628 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 KCNN2Q9H2S1 579 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 OR52D1Q9H346 318 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 RNF121Q9H920 327 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 SLC7A8Q9UHI5 535 aa10.25□□□□□ -0.77
YBX3-217ENST00000546164 ANK3Q12955 4377 aaKnown RBP10.24□□□□□ -0.77
YBX3-217ENST00000546164 FAM171A2A8MVW0 826 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 H7C1C5 153 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 H7C1Q1 480 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 CTLA4P16410 223 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 ZNF32P17041 273 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 MSR1P21757 451 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 LAP3P28838 519 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 GUCA1AP43080 201 aaPredicted RBP10.24□□□□□ -0.77
YBX3-217ENST00000546164 EVX1P49640 407 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 PPOXP50336 477 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 EFNA4P52798 201 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 RPS23P62266 143 aaKnown RBP10.24□□□□□ -0.77
YBX3-217ENST00000546164 LCN6P62502 163 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 GALK2Q01415 458 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 PLP2Q04941 152 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 RAB35Q15286 201 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 SGCAQ16586 387 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 OR2T5Q6IEZ7 315 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 KRT80Q6KB66 452 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 RPL13AP3Q6NVV1 102 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 ZNF620Q6ZNG0 422 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 SYT9Q86SS6 491 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 ADGRG5Q8IZF4 528 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 CIARTQ8N365 385 aaPredicted RBP10.24□□□□□ -0.77
YBX3-217ENST00000546164 LRRC18Q8N456 261 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 OR1J2Q8NGS2 313 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 OR2T29Q8NH02 315 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 MRPL24Q96A35 216 aaKnown RBP10.24□□□□□ -0.77
YBX3-217ENST00000546164 RASD2Q96D21 266 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 DOK1Q99704 481 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 SYT4Q9H2B2 425 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 CCNB1IP1Q9NPC3 277 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 POLE4Q9NR33 117 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 IL20RAQ9UHF4 553 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 CMAHPQ9Y471 501 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 IER3IP1Q9Y5U9 82 aa10.24□□□□□ -0.77
YBX3-217ENST00000546164 NAV3Q8IVL0 2385 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 IQCMA0A1B0GVH7 501 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 TMEM129A0AVI4 362 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 DHRS12A0PJE2 317 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 IDH3BO43837 385 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 KHDRBS3O75525 346 aaKnown RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 DNAJC8O75937 253 aaPredicted RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 CCNB2O95067 398 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 PPP1R3DO95685 299 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 PCSK6P29122 969 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 CDKN2AP42771 156 aaKnown RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 NUDT6P53370 316 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 DSCR9P59020 149 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 PCBD1P61457 104 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 PSG4Q00888 419 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 HSF2Q03933 536 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 TNK1Q13470 666 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 ENDOGQ14249 297 aaKnown RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 MSMPQ1L6U9 139 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 TBC1D28Q2M2D7 210 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 PABPC1L2AQ5JQF8 200 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 RASSF6Q6ZTQ3 369 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 PTCHD4Q6ZW05 846 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 PAQR4Q8N4S7 273 aaPredicted RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 CPEB3Q8NE35 698 aaKnown RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 OR10H5Q8NGA6 315 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 OR9Q2Q8NGE9 314 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 CANT1Q8WVQ1 401 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 ERMAPQ96PL5 475 aaPredicted RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 CHID1Q9BWS9 393 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 OR2H1Q9GZK4 316 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 LRMDAQ9H2I8 198 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 REEP1Q9H902 201 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 CDH20Q9HBT6 801 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 VNN3Q9NY84 501 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 IL20Q9NYY1 176 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 POMPQ9Y244 141 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 SAMHD1Q9Y3Z3 626 aaKnown RBP10.23□□□□□ -0.77
YBX3-217ENST00000546164 TIMM10BQ9Y5J6 103 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 CDH10Q9Y6N8 788 aa10.23□□□□□ -0.77
YBX3-217ENST00000546164 HIVEP2P31629 2446 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 A0A1W2PPL8 197 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 ARRDC5A6NEK1 342 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 C12orf71A8MTZ7 269 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 SOCS2O14508 198 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 GSC2O15499 205 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 SSX4O60224 188 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 GPRIN2O60269 458 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 ICMTO60725 284 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 ATP5HO75947 161 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 F12P00748 615 aaPredicted RBP10.22□□□□□ -0.77
YBX3-217ENST00000546164 GASTP01350 101 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 SCG5P05408 212 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 IGFBP1P08833 259 aaPredicted RBP10.22□□□□□ -0.77
YBX3-217ENST00000546164 CSF3P09919 207 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 STOMP27105 288 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms