RNA–Protein interactions for RNA: ENST00000544179.1

TM7SF3-216, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 2

Gene TM7SF3, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-216ENST00000544179 BNIP2Q12982 314 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 PDIA2Q13087 525 aaKnown RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 SLC39A6Q13433 755 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TFDP1Q14186 410 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TAF1AQ15573 450 aaPredicted RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TATDN3Q17R31 274 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 MICBQ29980 383 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 POM121L1PQ3SYA9 428 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 SBK1Q52WX2 424 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 AKIRIN2Q53H80 203 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 PIGGQ5H8A4 983 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 AGAP6Q5VW22 663 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 H3F3CQ6NXT2 135 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 SLC27A4Q6P1M0 643 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 FAM199XQ6PEV8 388 aaPredicted RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TMEM107Q6UX40 140 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 C3P1Q6ZMU1 363 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 C17orf107Q6ZR85 190 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 CDHR3Q6ZTQ4 885 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 MARCH9Q86YJ5 346 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 CRLF3Q8IUI8 442 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 ZNF584Q8IVC4 421 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 C11orf53Q8IXP5 236 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 ZNF683Q8IZ20 524 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 PUSL1Q8N0Z8 303 aaKnown RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 KIF2BQ8N4N8 673 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 MREGQ8N565 214 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TMEM99Q8N816 258 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 NUBPLQ8TB37 319 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 M1APQ8TC57 530 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 DYNC2LI1Q8TCX1 351 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 DNAJB3Q8WWF6 145 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 ST8SIA1Q92185 356 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TCEAL3Q969E4 200 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TMEM45BQ96B21 275 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 MCCC1Q96RQ3 725 aaPredicted RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 HOPXQ9BPY8 73 aaPredicted RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 C2orf88Q9BSF0 95 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 FEM1AQ9BSK4 669 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 WRAP53Q9BUR4 548 aaKnown RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 DDA1Q9BW61 102 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 RBM24Q9BX46 236 aaKnown RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 YTHDF1Q9BYJ9 559 aaKnown RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 HEXA-AS1Q9H8Q6 139 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 GPN2Q9H9Y4 310 aaPredicted RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 HRASLSQ9HDD0 168 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 RAB18Q9NP72 206 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 SDHAF2Q9NX18 166 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 THAP10Q9P2Z0 257 aaPredicted RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 MGAT4AQ9UM21 535 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 GUCA1BQ9UMX6 200 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 PSG11Q9UQ72 335 aa3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 TSSC4Q9Y5U2 329 aaPredicted RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 ARHGEF28Q8N1W1 1705 aaKnown RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 MAP2P11137 1827 aaKnown RBP3.47□□□□□ -1.85
TM7SF3-216ENST00000544179 DIP2CQ9Y2E4 1556 aa3.46□□□□□ -1.85
TM7SF3-216ENST00000544179 UMODL1Q5DID0 1318 aa3.46□□□□□ -1.85
TM7SF3-216ENST00000544179 USP42Q9H9J4 1324 aaKnown RBP3.46□□□□□ -1.85
TM7SF3-216ENST00000544179 MROH2AA6NES4 1674 aa3.46□□□□□ -1.85
TM7SF3-216ENST00000544179 USP6P35125 1406 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 IGHV4-30-2A0A087WSY4 118 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 IGHV3-20A0A0C4DH32 117 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 A0A1B0GV72 72 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 A0A1W2PNU3 283 aaPredicted RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 TMEM89A2RUT3 159 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 SHISA7A6NL88 538 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 EFCAB7A8K855 629 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 ZNF99A8MXY4 864 aaPredicted RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 NEDD8-MDP1E9PL57 170 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 PPIAL4DF5H284 164 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 SLC28A1O00337 649 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 CCRL2O00421 344 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 KPNA3O00505 521 aaPredicted RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 SDHDO14521 159 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 CYB561D2O14569 222 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 SIGLEC5O15389 551 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 RS1O15537 224 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 CHP2O43745 196 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 TIMM8AO60220 97 aaPredicted RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 RAMP3O60896 148 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 NXPH4O95158 308 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 SCELO95171 688 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 ANGPTL1O95841 491 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 ACTL6AO96019 429 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 SERPINA1P01009 418 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 KLK3P07288 261 aaPredicted RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 MMP10P09238 476 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 RBP1P09455 135 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 COX4I1P13073 169 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 FOLR2P14207 255 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 CXCR2P25025 360 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 DCKP27707 260 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 CYLC1P35663 651 aaPredicted RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 HSPA9P38646 679 aaKnown RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 ZFP36L2P47974 494 aaKnown RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 SRP9P49458 86 aaKnown RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 LSM6P62312 80 aaKnown RBP3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 HERVK_113P63132 956 aa3.46□□□□□ -1.86
TM7SF3-216ENST00000544179 DEFA6Q01524 100 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms