RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZNF658BQ4V348 819 aaPredicted RBP11.49□□□□□ -0.57
SMG8-202ENST00000543872 LPCAT3Q6P1A2 487 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 DNM1P46Q6ZS02 220 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 MTSS1LQ765P7 747 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 COX18Q8N8Q8 333 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 LINC01555Q8NAE3 123 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 OR13C8Q8NGS7 320 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 GPX8Q8TED1 209 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 SCN10AQ9Y5Y9 1956 aa11.49□□□□□ -0.57
SMG8-202ENST00000543872 COL4A3Q01955 1670 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 C7orf77A4D0Y5 90 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 TMEM235A6NFC5 223 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 RAB5AP20339 215 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 HTR5AP47898 357 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 FKBP1BP68106 108 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 DUSP8Q13202 625 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 ALG10BQ5I7T1 473 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 LEG1Q6P5S2 330 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 PARS2Q7L3T8 475 aaKnown RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 LYG2Q86SG7 212 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 BHLHE23Q8NDY6 225 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 OR2L2Q8NH16 312 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 NUDCD2Q8WVJ2 157 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 KIRREL1Q96J84 757 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 ELF4Q99607 663 aaPredicted RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 ALG12Q9BV10 488 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 SUCNR1Q9BXA5 334 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 TMEM100Q9NV29 134 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 PRR13Q9NZ81 148 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 WASF3Q9UPY6 502 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 MRPS33Q9Y291 106 aaKnown RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 XIRP2A4UGR9 3374 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 H7C1Q1 480 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 DOK2O60496 412 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 ERCC1P07992 297 aaPredicted RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 RAB6AP20340 208 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 GLP1RP43220 463 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 SLC39A5Q6ZMH5 540 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 REC114Q7Z4M0 266 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 C10orf53Q8N6V4 93 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 CCDC54Q8NEL0 328 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 SLC30A7Q8NEW0 376 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 EDAQ92838 391 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 RAB3CQ96E17 227 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 DPEP2Q9H4A9 486 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 RGCCQ9H4X1 137 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 OPA3Q9H6K4 179 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 UNKLQ9H9P5 680 aaKnown RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 CHRNA9Q9UGM1 479 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 IL36AQ9UHA7 158 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 MRM2Q9UI43 246 aaKnown RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 CES1P1Q9UKY3 287 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 USP34Q70CQ2 3546 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 A0A1W2PPV9 198 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 STARD6P59095 220 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 TCEA2Q15560 299 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 TTLL10Q6ZVT0 673 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 ZNF619Q8N2I2 560 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 ZNF615Q8N8J6 731 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 DTD2Q96FN9 168 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 ZNF764Q96H86 408 aaPredicted RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 ZNF681Q96N22 645 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 PRO1933Q9H354 126 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 FLRT3Q9NZU0 649 aa11.48□□□□□ -0.57
SMG8-202ENST00000543872 MTCL1Q9Y4B5 1905 aaKnown RBP11.48□□□□□ -0.57
SMG8-202ENST00000543872 TRBV23OR9-2A0A075B6M9 112 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 TBC1D3KA0A087X1G2 549 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 IGKV1-8A0A0C4DH67 115 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 A0A1W2PRU2 124 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 TBC1D3BA6NDS4 549 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 TBC1D3FA6NER0 549 aaPredicted RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 BLOC1S5-TXNDC5H3BN57 136 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 H7C1C5 153 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 LEFTY2O00292 366 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 DBIP07108 87 aaKnown RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 CD14P08571 375 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 MAOAP21397 527 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 NDUFA6P56556 154 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 LCN6P62502 163 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 RPP30P78346 268 aaKnown RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 EBPQ15125 230 aaKnown RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 USF2Q15853 346 aaPredicted RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 DCST2Q5T1A1 773 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 TBC1D3GQ6DHY5 549 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 FRMD1Q8N878 549 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 ZSCAN4Q8NAM6 433 aaPredicted RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 ADAD2Q8NCV1 583 aaKnown RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 ZNF417Q8TAU3 575 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 NUS1Q96E22 293 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CMKLR1Q99788 373 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 COMMD4Q9H0A8 199 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CYTL1Q9NRR1 136 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 PPP4R1LQ9P1A2 415 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 CGGBP1Q9UFW8 167 aaPredicted RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 DCDC2BA2VCK2 349 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 DCTN6O00399 190 aa11.47□□□□□ -0.57
SMG8-202ENST00000543872 PPIHO43447 177 aaKnown RBP11.47□□□□□ -0.57
SMG8-202ENST00000543872 RDH16O75452 317 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms