RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NSMCE2Q96MF7 247 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 NDEL1Q9GZM8 345 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 RAB1BQ9H0U4 201 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 MUC13Q9H3R2 512 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 C1orf198Q9H425 327 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 AURKCQ9UQB9 309 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 POMPQ9Y244 141 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 UGT2A1Q9Y4X1 527 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 FKBP7Q9Y680 259 aa8.4□□□□□ -1.06
TNFRSF1A-214ENST00000543048 SONP18583 2426 aaKnown RBP8.4□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FN1P02751 2386 aaKnown RBP8.4□□□□□ -1.07
TNFRSF1A-214ENST00000543048 IGHV4-30-2A0A087WSY4 118 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 IGKV1D-43A0A0B4J1Z2 117 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DIRAS1O95057 198 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SLC2A10O95528 541 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 STAMBPO95630 424 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ERCC1P07992 297 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MMP7P09237 267 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SLC25A16P16260 332 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CDAP32320 146 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 OMPP47874 163 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PPOXP50336 477 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PDLIM4P50479 330 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 RPS23P62266 143 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ELF3P78545 371 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 VLDLRP98155 873 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FLOT2Q14254 428 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 KPNB1Q14974 876 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 IQCCQ4KMZ1 466 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FGD3Q5JSP0 725 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FAM27BQ5VT28 67 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF584Q8IVC4 421 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SVOPLQ8N434 492 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF525Q8N782 197 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FAM86B1Q8N7N1 296 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SLC30A7Q8NEW0 376 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF519Q8TB69 540 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 C10orf105Q8TEF2 133 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 NEU4Q8WWR8 484 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MRPL24Q96A35 216 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DHRS1Q96LJ7 313 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SORCS2Q96PQ0 1159 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TSPAN32Q96QS1 320 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TRIM15Q9C019 465 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CDH20Q9HBT6 801 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CCNB1IP1Q9NPC3 277 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 KRCC1Q9NPI7 259 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 V9GYQ6 96 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ABCA2Q9BZC7 2435 aa8.39□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TRBV4-1A0A0J9YWV2 114 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LOC390937A0A1W2PQ73 354 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SH3PXD2BA1X283 911 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 UNC119BA6NIH7 251 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 XKRYO14609 159 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ACOT8O14734 319 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ARPC2O15144 300 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 LY6HO94772 140 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 NDUFB2O95178 105 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GADD45GO95257 159 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SEMG1P04279 462 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TP53P04637 393 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FABP3P05413 133 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ADRA2AP08913 450 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CST2P09228 141 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ZNF26P17031 533 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 RAD52P43351 418 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 UCP2P55851 309 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ACTR3P61158 418 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 HSF2Q03933 536 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FMODQ06828 376 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TRAP1Q12931 704 aaKnown RBP8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TRIM25Q14258 630 aaKnown RBP8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SEC23BQ15437 767 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TBC1D28Q2M2D7 210 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PABPC1L2AQ5JQF8 200 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GPR139Q6DWJ6 353 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DPY19L2P2Q6ZN68 376 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 ALDH16A1Q8IZ83 802 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CLDN22Q8N7P3 220 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 NABP1Q96AH0 204 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 Q96M85 177 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 FUZQ9BT04 418 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MRPL37Q9BZE1 423 aaKnown RBP8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MS4A5Q9H3V2 200 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 DYNLRB1Q9NP97 96 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 MYOZ1Q9NP98 299 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 IL1RAPQ9NPH3 570 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 REV1Q9UBZ9 1251 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SIGLEC7Q9Y286 467 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 TIMM10BQ9Y5J6 103 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
TNFRSF1A-214ENST00000543048 PRSS37A4D1T9 235 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 NDUFS8O00217 210 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SYNGR3O43761 229 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 GPRIN2O60269 458 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 KRT36O76013 467 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 SNAP29O95721 258 aa8.37□□□□□ -1.07
TNFRSF1A-214ENST00000543048 CCL2P13500 99 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms