RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 OR52P1PQ8NH57 321 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 COQ8AQ8NI60 647 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 NEURL3Q96EH8 262 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 PIK3IP1Q96FE7 263 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 CNDP1Q96KN2 507 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 SERPINB12Q96P63 405 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 RPP21Q9H633 154 aaKnown RBP1.24□□□□□ -2.21
KNTC1-213ENST00000542727 CWH43Q9H720 699 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 SYNDIG1Q9H7V2 258 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 FN3KRPQ9HA64 309 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 NT5MQ9NPB1 228 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 SAMSN1Q9NSI8 373 aaKnown RBP1.24□□□□□ -2.21
KNTC1-213ENST00000542727 FAM49BQ9NUQ9 324 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 KLHL28Q9NXS3 571 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 SUN2Q9UH99 717 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 IKZF2Q9UKS7 526 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 PEX16Q9Y5Y5 336 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 TMEM14AQ9Y6G1 99 aa1.24□□□□□ -2.21
KNTC1-213ENST00000542727 TNS2Q63HR2 1409 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 CNTNAP1P78357 1384 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 DHX57Q6P158 1386 aaKnown RBP1.23□□□□□ -2.21
KNTC1-213ENST00000542727 A0A1W2PPV9 198 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 TMEM223A0PJW6 202 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 CLRN2A0PK11 232 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 SPECC1L-ADORA2AF8WAN1 911 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 RPL36A-HNRNPH2H7BZ11 118 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 K7EM74 188 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 DPM1O60762 260 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 MPZL1O95297 269 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 DCNP07585 359 aaKnown RBP1.23□□□□□ -2.21
KNTC1-213ENST00000542727 CT62P0C5K7 136 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 MX1P20591 662 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 HNRNPH3P31942 346 aaKnown RBP1.23□□□□□ -2.21
KNTC1-213ENST00000542727 SLC11A1P49279 550 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 PRMT2P55345 433 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 MRPS22P82650 360 aaKnown RBP1.23□□□□□ -2.21
KNTC1-213ENST00000542727 PITPNAQ00169 270 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 BST1Q10588 318 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 RCAN2Q14206 197 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 PIGHQ14442 188 aaPredicted RBP1.23□□□□□ -2.21
KNTC1-213ENST00000542727 PRSS8Q16651 343 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 SMUG1Q53HV7 270 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ANKRD22Q5VYY1 191 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 METTL21CQ5VZV1 264 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 SPECC1LQ69YQ0 1117 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 CENPPQ6IPU0 288 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ANKRD26P1Q6NSI1 321 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 TMEM135Q86UB9 458 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 MYOCDQ8IZQ8 938 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 UBE2J2Q8N2K1 259 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 LIX1Q8N485 282 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ZFP41Q8N8Y5 198 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 OR2L3Q8NG85 312 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 OR1S2Q8NGQ3 325 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 OR10R2Q8NGX6 335 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 OR8U1Q8NH10 309 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 OR5B3Q8NH48 314 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 PLPPR1Q8TBJ4 325 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ZNF502Q8TBZ5 544 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 LKAAEAR1Q8TD35 194 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 RNF139Q8WU17 664 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ABHD3Q8WU67 409 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 RGP1Q92546 391 aaPredicted RBP1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ESR2Q92731 530 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 L3HYPDHQ96EM0 354 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ZNF681Q96N22 645 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 NPY6RQ99463 290 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ZBTB18Q99592 522 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 HYPKQ9NX55 129 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 NUP50Q9UKX7 468 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 ST3GAL6Q9Y274 331 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 IKBKGQ9Y6K9 419 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 YEATS2Q9ULM3 1422 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 HIVEP2P31629 2446 aa1.23□□□□□ -2.21
KNTC1-213ENST00000542727 NLRC5Q86WI3 1866 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 IGLV1-50A0A075B6I6 118 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 SMCO2A6NFE2 343 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 RRP8O43159 456 aaKnown RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 PALMO75781 387 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 CCNKO75909 580 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 SERPINA3P01011 423 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 IL4P05112 153 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 POLR2MP0CAP2 368 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 MCF2P10911 925 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 NCF2P19878 526 aaPredicted RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 RAB3BP20337 219 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 KITLGP21583 273 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 DTYMKP23919 212 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 CHMLP26374 656 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 ZNF138P52744 262 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 LOXL1Q08397 574 aaPredicted RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 IFT88Q13099 833 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 THEM4Q5T1C6 240 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 SAXO2Q658L1 398 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 DUX4L9Q6RFH8 374 aaPredicted RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 CASC1Q6TDU7 716 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 SLC25A48Q6ZT89 311 aaKnown RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 WDR86Q86TI4 376 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 CALHM1Q8IU99 346 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 MMAAQ8IVH4 418 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms