RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MESP2Q0VG99 397 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 GINS1Q14691 196 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 EBPQ15125 230 aaKnown RBP5.58□□□□□ -1.52
SNHG1-211ENST00000539921 CNN3Q15417 329 aaKnown RBP5.58□□□□□ -1.52
SNHG1-211ENST00000539921 C2orf68Q2NKX9 166 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ACOT6Q3I5F7 207 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-211ENST00000539921 HIKESHIQ53FT3 197 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 PLAC9Q5JTB6 97 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 TMEM69Q5SWH9 247 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 PRSS54Q6PEW0 395 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OPN5Q6U736 354 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 UNQ9370/PRO34162Q6UXP9 181 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 SMIM5Q71RC9 77 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 MTSS1LQ765P7 747 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 TAF8Q7Z7C8 310 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 SCD5Q86SK9 330 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 SPNS2Q8IVW8 549 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 CMTM4Q8IZR5 234 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 SYS1Q8N2H4 156 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 MTURNQ8N3F0 131 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 FAM71E2Q8N5Q1 922 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 C11orf42Q8N5U0 333 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 NPWQ8N729 165 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 Q8NFD4 153 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OR4D6Q8NGJ1 314 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OR5D18Q8NGL1 313 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OR4C16Q8NGL9 310 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OR10Q1Q8NGQ4 319 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OR13C2Q8NGS9 318 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OR1P1Q8NH06 330 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF671Q8TAW3 534 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ABHD4Q8TB40 342 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 SFXN5Q8TD22 340 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 CD300LFQ8TDQ1 290 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 MITD1Q8WV92 249 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 SPRYD4Q8WW59 207 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-211ENST00000539921 TMED6Q8WW62 240 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 LINC01599Q8WXQ3 324 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 NDRG1Q92597 394 aaKnown RBP5.58□□□□□ -1.52
SNHG1-211ENST00000539921 CDS1Q92903 461 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 PSMG2Q969U7 264 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ISOC2Q96AB3 205 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 SLC25A38Q96DW6 304 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 MRGPRX1Q96LB2 322 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF48Q96MX3 618 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-211ENST00000539921 AMDHD1Q96NU7 426 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 IP6K3Q96PC2 410 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 PGLYRP2Q96PD5 576 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 DIRC2Q96SL1 478 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 LGR4Q9BXB1 951 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 CTDSP1Q9GZU7 261 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF350Q9GZX5 532 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ARV1Q9H2C2 271 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF430Q9H8G1 570 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-211ENST00000539921 IPPKQ9H8X2 491 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 BEX1Q9HBH7 125 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 PDE7BQ9NP56 450 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 NRIP3Q9NQ35 241 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 P4HTMQ9NXG6 502 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 TVP23BQ9NYZ1 205 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 RBPJLQ9UBG7 517 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 FBXW11Q9UKB1 542 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 FBXW2Q9UKT8 454 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 PADI1Q9ULC6 663 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 OARD1Q9Y530 152 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 COLEC10Q9Y6Z7 277 aa5.58□□□□□ -1.52
SNHG1-211ENST00000539921 COL4A1P02462 1669 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 TGIF2-C20orf24A0A0A6YYL0 155 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SERTM2A0A1B0GWG4 89 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 A0A1W2PPE2 198 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 TRBC2A0A5B9 178 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SMIM30A4D0T7 59 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 NPEPPSL1A6NEC2 478 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 PRAMEF25A6NGN4 478 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SLC22A31A6NKX4 558 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 GJE1A6NN92 205 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 IFITM5A6NNB3 132 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 F5H5T6 163 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 RAB27BO00194 218 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SCAMP2O15127 329 aaKnown RBP5.57□□□□□ -1.52
SNHG1-211ENST00000539921 TSPAN6O43657 245 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 LDB2O43679 373 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 NME6O75414 186 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-211ENST00000539921 GLSO94925 669 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SLC16A8O95907 504 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 MMP2P08253 660 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 TRGC1P0CF51 173 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 ZNF865P0CJ78 1059 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SLC35E2P0CK97 266 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SMIM10L2AP0DMW4 78 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SMIM10L2BP0DMW5 78 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 LIPCP11150 499 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 GTF2F2P13984 249 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 MAKP20794 623 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 MMP11P24347 488 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 DPP4P27487 766 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 CEACAM8P31997 349 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-211ENST00000539921 SOX18P35713 384 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 LPAR6P43657 344 aa5.57□□□□□ -1.52
SNHG1-211ENST00000539921 OR3A2P47893 321 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms