RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SP9P0CG40 484 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 CAPZA2P47755 286 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 DLX5P56178 289 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 ZP1P60852 638 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 C17orf67Q0P5P2 114 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 SNTA1Q13424 505 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 SGCBQ16585 318 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 GSG1Q2KHT4 349 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 FAM69AQ5T7M9 428 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 MAMDC2Q7Z304 686 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-210ENST00000538120 PXKQ7Z7A4 578 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 COMMD7Q86VX2 200 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 STK35Q8TDR2 534 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 ELP5Q8TE02 316 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 THAP4Q8WY91 577 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 GHSRQ92847 366 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 GCDHQ92947 438 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-210ENST00000538120 C19orf25Q9UFG5 118 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-210ENST00000538120 FLVCR2Q9UPI3 526 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 KLHDC2Q9Y2U9 406 aa9.66□□□□□ -0.86
CLIP1-210ENST00000538120 MPDZO75970 2070 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 TEX51A0A1B0GUA7 166 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 A0A1W2PRG6 482 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 FTCDNL1E5RQL4 147 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 G3V3Q6 166 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 CDK2AP1O14519 115 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 KLF7O75840 302 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-210ENST00000538120 OR2J2O76002 312 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 HRGP04196 525 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 IL11P20809 199 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 F8A1P23610 371 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 GRPRP30550 384 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 SELENOPP49908 381 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ACTA2P62736 377 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ACTG2P63267 376 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 CDK5R1Q15078 307 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 CD276Q5ZPR3 534 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 GPR139Q6DWJ6 353 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 PYHIN1Q6K0P9 492 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 TMEM65Q6PI78 240 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ARSKQ6UWY0 536 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 SNX33Q8WV41 574 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 RBP7Q96R05 134 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 C1QTNF6Q9BXI9 259 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 AUNIPQ9H7T9 357 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 DLL4Q9NR61 685 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 MOKQ9UQ07 419 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 NUBP2Q9Y5Y2 271 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ZDBF2Q9HCK1 2354 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 C11orf98E9PRG8 122 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 PLPP3O14495 311 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 LDOC1O95751 146 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ADRB1P08588 477 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ATF1P18846 271 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ACP1P24666 158 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 DNASE1P24855 282 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 RPS11P62280 158 aaKnown RBP eCLIP9.65□□□□□ -0.86
CLIP1-210ENST00000538120 SIRPAP78324 504 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 TRAM1Q15629 374 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 EEF1A1P5Q5VTE0 462 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 SLC16A9Q7RTY1 509 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 OR10G3Q8NGC4 313 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ZNF519Q8TB69 540 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 RPS4Y2Q8TD47 263 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ST8SIA1Q92185 356 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ARRDC1-AS1Q9H2J1 176 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 GNG8Q9UK08 70 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 EDARQ9UNE0 448 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 B3GALT1Q9Y5Z6 326 aa9.65□□□□□ -0.86
CLIP1-210ENST00000538120 ETV2O00321 342 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF593O00488 134 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-210ENST00000538120 EFNA2O43921 213 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 CELA2AP08217 269 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 PSMB10P40306 273 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 GBX2P52951 348 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-210ENST00000538120 SUMO3P55854 103 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-210ENST00000538120 HSF2Q03933 536 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 MFSD13AQ14CX5 517 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 ACKR1Q16570 336 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 ACSM3Q53FZ2 586 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 TMEM255AQ5JRV8 349 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 LUZP2Q86TE4 346 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 TMEM234Q8WY98 164 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 NINJ1Q92982 152 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 MR1Q95460 341 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 ORAI1Q96D31 301 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 SMIM19Q96E16 107 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 OR2M2Q96R28 347 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 SCPEP1Q9HB40 452 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF224Q9NZL3 707 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 NXT1Q9UKK6 140 aaKnown RBP9.64□□□□□ -0.87
CLIP1-210ENST00000538120 EXPH5Q8NEV8 1989 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 WDFY3Q8IZQ1 3526 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 MEIKINA0A087WXM9 373 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 IGLV3-32A0A0A0MS00 114 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 IGHV1-45A0A0A0MS14 117 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 TVP23AA6NH52 213 aa9.64□□□□□ -0.87
CLIP1-210ENST00000538120 SHISA8B8ZZ34 492 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms