RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SOCS2O14508 198 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 MPZL1O95297 269 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 CLPTM1O96005 669 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 CTLA4P16410 223 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 CCNOP22674 350 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 CALB2P22676 271 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 CDKN2AP42771 156 aaKnown RBP12.26□□□□□ -0.45
UBE3B-206ENST00000536398 HSF2Q03933 536 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 KRR1Q13601 381 aaKnown RBP12.26□□□□□ -0.45
UBE3B-206ENST00000536398 ENDOGQ14249 297 aaKnown RBP12.26□□□□□ -0.45
UBE3B-206ENST00000536398 ALKBH6Q3KRA9 238 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 PTCHD4Q6ZW05 846 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF416Q9BWM5 594 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 RAB1BQ9H0U4 201 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 WNT5BQ9H1J7 359 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 KCNN2Q9H2S1 579 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 CDH20Q9HBT6 801 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 DYNLRB1Q9NP97 96 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 CCNB1IP1Q9NPC3 277 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 TAS2R1Q9NYW7 299 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 REV1Q9UBZ9 1251 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 DUSP13Q9UII6 198 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 FKBP7Q9Y680 259 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 LYNX1G3V0Z9 82 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 XKRYO14609 159 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 OR10H3O60404 316 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 SLC16A7O60669 478 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 PPP1R3DO95685 299 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 CST2P09228 141 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 LYNX1P0DP58 116 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 STOMP27105 288 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 SDHAP31040 664 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 WNT5AP41221 380 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 PDLIM4P50479 330 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 UCP2P55851 309 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 SMIM11AP58511 58 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 PLP2Q04941 152 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 PPP1R8Q12972 351 aaKnown RBP12.25□□□□□ -0.45
UBE3B-206ENST00000536398 TBC1D28Q2M2D7 210 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 SMARCD3Q6STE5 483 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 DPY19L2P2Q6ZN68 376 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 DHFR2Q86XF0 187 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 FNDC8Q8TC99 324 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 GPX7Q96SL4 187 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-206ENST00000536398 OR2H1Q9GZK4 316 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 SYT4Q9H2B2 425 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 RERGLQ9H628 205 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 POLE4Q9NR33 117 aa12.25□□□□□ -0.45
UBE3B-206ENST00000536398 C5orf49A4QMS7 147 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 VWC2LB2RUY7 222 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 SYNGR3O43761 229 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 SNAP29O95721 258 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 GPANK1O95872 356 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 LCKP06239 509 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 NAT2P11245 290 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 NR2C1P13056 603 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 DAOP14920 347 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 SLC25A16P16260 332 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 MSR1P21757 451 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 APLNRP35414 380 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 EVX1P49640 407 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 RPS23P62266 143 aaKnown RBP12.24□□□□□ -0.45
UBE3B-206ENST00000536398 TRIM25Q14258 630 aaKnown RBP12.24□□□□□ -0.45
UBE3B-206ENST00000536398 RFX4Q33E94 735 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 GPR139Q6DWJ6 353 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 RGS7BPQ6MZT1 257 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-206ENST00000536398 PGBD2Q6P3X8 592 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF101Q8IZC7 436 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 ICA1LQ8NDH6 482 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 OR9Q2Q8NGE9 314 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 OR4C15Q8NGM1 316 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 OR1J2Q8NGS2 313 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 FANK1Q8TC84 345 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 BCAS4Q8TDM0 211 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 POM121L2Q96KW2 1035 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 NSD1Q96L73 2696 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-206ENST00000536398 SAMD8Q96LT4 415 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 TSSK2Q96PF2 358 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 NUAK2Q9H093 628 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 C1orf198Q9H425 327 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 KRCC1Q9NPI7 259 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-206ENST00000536398 VNN3Q9NY84 501 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 TMCC3Q9ULS5 477 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 COA3Q9Y2R0 106 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-206ENST00000536398 LYVE1Q9Y5Y7 322 aa12.24□□□□□ -0.45
UBE3B-206ENST00000536398 ABCA1O95477 2261 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 A0A1W2PPW3 197 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 M0R233 179 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 UBOX5O94941 541 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 STAMBPO95630 424 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 TXNDC12O95881 172 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 PTHP01270 115 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 CSF3P09919 207 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 FPR3P25089 353 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 GUCA1AP43080 201 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-206ENST00000536398 NR4A2P43354 598 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 GSSP48637 474 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 HMGA2P52926 109 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms