RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 CCDC160A6NGH7 325 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 C1QL1O75973 258 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 YES1P07947 543 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 BLVRAP53004 296 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 TLE1Q04724 770 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 RBPJQ06330 500 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 CDONQ4KMG0 1287 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 C10orf128Q5T292 105 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 GFRALQ6UXV0 394 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 TMPRSS11AQ6ZMR5 421 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 NUFIP2Q7Z417 695 aaKnown RBP19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 OTOSQ8NHW6 89 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 RNF166Q96A37 237 aaPredicted RBP19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 INTS12Q96CB8 462 aaKnown RBP19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 ISOC1Q96CN7 298 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 SEC61A2Q9H9S3 476 aa19.38■□□□□ 0.69
PACSIN3-209ENST00000532457 MED12LQ86YW9 2145 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 PNMA8CA0A1B0GUJ8 204 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 A0A1W2PPL8 197 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 ZNF724A8MTY0 619 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 GPR171O14626 319 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 SLC43A1O75387 559 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 WNT11O96014 354 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 ENTPD1P49961 510 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 MLLT11Q13015 90 aaPredicted RBP19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 RNPS1Q15287 305 aaKnown RBP19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 PCK2Q16822 640 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 ANKRD13BQ86YJ7 626 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 ST6GALNAC3Q8NDV1 305 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 FNDC8Q8TC99 324 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 THEM6Q8WUY1 208 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 RPL3LQ92901 407 aaKnown RBP19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 TRIB1Q96RU8 372 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 RNF122Q9H9V4 155 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 EMC7Q9NPA0 242 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 RALYQ9UKM9 306 aaKnown RBP19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 ZNF175Q9Y473 711 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 ZNF670-ZNF695F2Z2N8 137 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 DHHO43323 396 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 IGHV3-9P01782 118 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 SPARCP09486 303 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 TSPO2Q5TGU0 170 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 LIPKQ5VXJ0 399 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 CORO6Q6QEF8 472 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 VASH1Q7L8A9 365 aaPredicted RBP19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 LINC00346Q8IVM7 164 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 PHC2Q8IXK0 858 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 RBM24Q9BX46 236 aaKnown RBP19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 ISYNA1Q9NPH2 558 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 MRM2Q9UI43 246 aaKnown RBP19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 LAMP5Q9UJQ1 280 aa19.37■□□□□ 0.69
PACSIN3-209ENST00000532457 AKAP8O43823 692 aaKnown RBP19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 MRPL33O75394 65 aaKnown RBP19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 HRGP04196 525 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 CPEP16870 476 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 GADD45AP24522 165 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 ACSM1Q08AH1 577 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 TPBGQ13641 420 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 TEX30Q5JUR7 227 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 RPTNQ6XPR3 784 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 PLEKHG7Q6ZR37 379 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 SNX33Q8WV41 574 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 DOK1Q99704 481 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 ULBP2Q9BZM5 246 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 CRLF2Q9HC73 371 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 RSL24D1Q9UHA3 163 aaKnown RBP19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 ENPP5Q9UJA9 477 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 GRIP1Q9Y3R0 1128 aa19.36■□□□□ 0.69
PACSIN3-209ENST00000532457 MT-ND5P03915 603 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 CTF1Q16619 201 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 NABP1Q96AH0 204 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 C12orf43Q96C57 262 aaKnown RBP19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 PELI1Q96FA3 418 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 ABHD6Q9BV23 337 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 OR51E2Q9H255 320 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 SLC7A10Q9NS82 523 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 SLCO1C1Q9NYB5 712 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 EMC3Q9P0I2 261 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 H3BMQ9 156 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 ZNF823P16415 610 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 ABOP16442 354 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 TMBIM6P55061 237 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 KCNMB1Q16558 191 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 CNPY1Q3B7I2 92 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 ZNF585AQ6P3V2 769 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 FOXL2NBQ6ZUU3 175 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 ALKBH3Q96Q83 286 aaPredicted RBP19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 POLE4Q9NR33 117 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 ACOXLQ9NUZ1 547 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 CYB5R1Q9UHQ9 305 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 GNG8Q9UK08 70 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 SF3B6Q9Y3B4 125 aaKnown RBP19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 LHFPL6Q9Y693 200 aa19.35■□□□□ 0.69
PACSIN3-209ENST00000532457 RP1L1Q8IWN7 2480 aaPredicted RBP19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 AHRRA9YTQ3 701 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 CCRL2O00421 344 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 ATE1O95260 518 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 ABHD16AO95870 558 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 OR8G3PP0DMU2 310 aa19.34■□□□□ 0.69
PACSIN3-209ENST00000532457 PSMB10P40306 273 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms