RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 CAMK2AQ9UQM7 478 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 CSMD1Q96PZ7 3565 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 SPTBP11277 2137 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 SHANK1Q9Y566 2161 aa10.55□□□□□ -0.72
USF1-208ENST00000528768 PDZD2O15018 2839 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 IGLV3-32A0A0A0MS00 114 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 TVP23AA6NH52 213 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 TPPPO94811 219 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 RPP14O95059 124 aaKnown RBP10.54□□□□□ -0.72
USF1-208ENST00000528768 FBXO45P0C2W1 286 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 OR8G3PP0DMU2 310 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 ZNF823P16415 610 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 ALOX5APP20292 161 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 GRNP28799 593 aaKnown RBP10.54□□□□□ -0.72
USF1-208ENST00000528768 RFX2P48378 723 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 RAB25P57735 213 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 GLO1Q04760 184 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 PUDPQ08623 228 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 SLC25A53Q5H9E4 307 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 UBE2NLQ5JXB2 153 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 FAM69BQ5VUD6 431 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 LIPNQ5VXI9 398 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 MRPL14Q6P1L8 145 aaKnown RBP10.54□□□□□ -0.72
USF1-208ENST00000528768 OPN5Q6U736 354 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 PM20D2Q8IYS1 436 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 RFLNBQ8N5W9 214 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 CELF2-AS1Q8N7Q2 184 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 SLC38A9Q8NBW4 561 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 DUSP18Q8NEJ0 188 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 OR4M1Q8NGD0 313 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 OTOSQ8NHW6 89 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 ZNF417Q8TAU3 575 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 ZNF519Q8TB69 540 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 GPR148Q8TDV2 347 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 OR14A2Q96R54 314 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 ZNF587Q96SQ5 575 aaPredicted RBP10.54□□□□□ -0.72
USF1-208ENST00000528768 SPSB2Q99619 263 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 CTRCQ99895 268 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 THAP7Q9BT49 309 aaPredicted RBP10.54□□□□□ -0.72
USF1-208ENST00000528768 WACQ9BTA9 647 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 ULBP3Q9BZM4 244 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 CHST11Q9NPF2 352 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 NOX4Q9NPH5 578 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 ALKBH4Q9NXW9 302 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 MYOTQ9UBF9 498 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 B3GALT5Q9Y2C3 310 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 V9GY05 133 aa10.54□□□□□ -0.72
USF1-208ENST00000528768 A0A087WZY1 265 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 A0A0G2JK05 382 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 MEIOCA2RUB1 952 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 C21orf140B9A014 251 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 ZNF593O00488 134 aaPredicted RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 SLC16A7O60669 478 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 ZNF254O75437 659 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 KHDRBS3O75525 346 aaKnown RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 TIAF1O95411 115 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 PDGFAP04085 211 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 EIF4EP06730 217 aaKnown RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 RAB40ALP0C0E4 278 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 CALCBP10092 127 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 IMPDH2P12268 514 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 HLA-DMAP28067 261 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 THBS2P35442 1172 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 EIF1P41567 113 aaKnown RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 CCR9P51686 369 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 SCAND1P57086 179 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 OR10A3P58181 314 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 SNTA1Q13424 505 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 FAM27D1Q5T7N8 215 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 FDX2Q6P4F2 183 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 KRT77Q7Z794 578 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 ADPRHL1Q8NDY3 354 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 OR4K17Q8NGC6 315 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 THAP3Q8WTV1 239 aaPredicted RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 SLC25A43Q8WUT9 341 aaPredicted RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 RNF138Q8WVD3 245 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 ZNRF4Q8WWF5 429 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 RAB40AQ8WXH6 277 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 MR1Q95460 341 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 TSSK2Q96PF2 358 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 DERL3Q96Q80 235 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 OR8B4Q96RC9 309 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 WDR77Q9BQA1 342 aaPredicted RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 COPZ2Q9P299 210 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 MRM2Q9UI43 246 aaKnown RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 WIF1Q9Y5W5 379 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 ETV7Q9Y603 341 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 MRPS18BQ9Y676 258 aaKnown RBP10.53□□□□□ -0.72
USF1-208ENST00000528768 ADGRG4Q8IZF6 3080 aa10.53□□□□□ -0.72
USF1-208ENST00000528768 CELSR1Q9NYQ6 3014 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 LOC102723996A0A087X1L8 192 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 TRBV5-5A0A0J9YX44 114 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 A0A0X1KG70 313 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 SLC22A23A1A5C7 686 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 IFITM5A6NNB3 132 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 B4DXG7 233 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 H7C1C5 153 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 AIPO00170 330 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms