RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NDUFA8P51970 172 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PNLIPRP2P54317 469 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PSMD4P55036 377 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 NAP1L1P55209 391 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 LIM2P55344 173 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CTBP2P56545 445 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TBPL1P62380 186 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PRAMEP78395 509 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CCZ1BP86790 482 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CCZ1P86791 482 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 CDK16Q00536 496 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 HMGCS1Q01581 520 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 HSPA14Q0VDF9 509 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ZP4Q12836 540 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 STX4Q12846 297 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CDH17Q12864 832 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 LCP2Q13094 533 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PRKG2Q13237 762 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SLAMF1Q13291 335 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PNOCQ13519 176 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 GGTLC2Q14390 218 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PRPSAP1Q14558 356 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SLMAPQ14BN4 828 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 HERPUD1Q15011 391 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PON3Q15166 354 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SLC9A3R2Q15599 337 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 MOGQ16653 247 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PARP6Q2NL67 630 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 UGT3A2Q3SY77 523 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 DEFB134Q4QY38 66 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TMEM155Q4W5P6 130 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SYT14P1Q58G82 188 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 KHDRBS2Q5VWX1 349 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 FBXW9Q5XUX1 488 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TMEM154Q6P9G4 183 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 METAP1DQ6UB28 335 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 SBSNQ6UWP8 590 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CES3Q6UWW8 571 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CCBE1Q6UXH8 406 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 LRRN1Q6UXK5 716 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ZNF841Q6ZN19 808 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 BHLHA15Q7RTS1 189 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 ABHD12BQ7Z5M8 362 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 CPLX4Q7Z7G2 160 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 DPPA2Q7Z7J5 298 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TMPRSS11BQ86T26 416 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SLC25A42Q86VD7 318 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 NUDT13Q86X67 352 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 COMMD2Q86X83 199 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 NDUFA11Q86Y39 141 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CNTN4Q8IWV2 1026 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 OR4N5Q8IXE1 308 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PRSS58Q8IYP2 241 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 UBQLNLQ8IYU4 475 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CDK20Q8IZL9 346 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 Q8N2B8 174 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TCAIMQ8N3R3 496 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 SVOPLQ8N434 492 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TC2NQ8N9U0 490 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ZSCAN4Q8NAM6 433 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 OR13C3Q8NGS6 347 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 OR4L1Q8NH43 312 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 RAB3IL1Q8TBN0 382 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 FAM110BQ8TC76 370 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 BLOC1S5Q8TDH9 187 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CCDC107Q8WV48 283 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 NELFBQ8WX92 580 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 RAPGEF5Q92565 580 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 LPGAT1Q92604 370 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 RDH5Q92781 318 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 P3H4Q92791 437 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 ADIPOR1Q96A54 375 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TMEM45BQ96B21 275 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 UPRTQ96BW1 309 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 THOC1Q96FV9 657 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 RBM18Q96H35 190 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 SFXN2Q96NB2 322 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 BIRC8Q96P09 236 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 DGAT2Q96PD7 388 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PCDHB18PQ96TA0 734 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 GPR21Q99679 349 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 AGPAT1Q99943 283 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 AIF1LQ9BQI0 150 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CRACR2AQ9BSW2 395 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 URM1Q9BTM9 101 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 EFCAB11Q9BUY7 163 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 IL22Q9GZX6 179 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 WNT5BQ9H1J7 359 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 OPN3Q9H1Y3 402 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 CENPHQ9H3R5 247 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 HEXA-AS1Q9H8Q6 139 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CHMP1AQ9HD42 196 aaPredicted RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 RAB18Q9NP72 206 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 MMP26Q9NRE1 261 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 PRTFDC1Q9NRG1 225 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TUBG2Q9NRH3 451 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 TNFRSF19Q9NS68 423 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 CA10Q9NS85 328 aa1.2□□□□□ -2.22
CD44-212ENST00000524922 LYARQ9NX58 379 aaKnown RBP1.2□□□□□ -2.22
CD44-212ENST00000524922 CHCHD3Q9NX63 227 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms