RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 GGNQ86UU5 652 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 EGFL6Q8IUX8 553 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 OR13C5Q8NGS8 318 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 OTOSQ8NHW6 89 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 TAAR6Q96RI8 345 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 AMELYQ99218 206 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 EMC6Q9BV81 110 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 ZDHHC11Q9H8X9 412 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 KCNG2Q9UJ96 466 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 LHX6Q9UPM6 363 aa12.89□□□□□ -0.35
CLN8-204ENST00000519254 COA3Q9Y2R0 106 aaPredicted RBP12.89□□□□□ -0.35
CLN8-204ENST00000519254 ANKRD11Q6UB99 2663 aaPredicted RBP12.88□□□□□ -0.35
CLN8-204ENST00000519254 TRGV5A0A0B4J1U4 118 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 IGKV1D-43A0A0B4J1Z2 117 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 AQP7P3A6NL99 342 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 TRAF3IP2O43734 574 aaPredicted RBP12.88□□□□□ -0.35
CLN8-204ENST00000519254 NCR1O76036 304 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 CD40LGP29965 261 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 TNFSF8P32971 234 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 SUCLG1P53597 346 aaKnown RBP12.88□□□□□ -0.35
CLN8-204ENST00000519254 NANOS3P60323 173 aaKnown RBP12.88□□□□□ -0.35
CLN8-204ENST00000519254 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLN8-204ENST00000519254 H3F3AP84243 136 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 ZNF45Q02386 682 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 HBMQ6B0K9 141 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 SNX29P2Q8IUI4 249 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 PARP16Q8N5Y8 322 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 FNDC8Q8TC99 324 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 ABTB1Q969K4 478 aaPredicted RBP12.88□□□□□ -0.35
CLN8-204ENST00000519254 OXGR1Q96P68 337 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 SH3GL3Q99963 347 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 MRPL13Q9BYD1 178 aaKnown RBP12.88□□□□□ -0.35
CLN8-204ENST00000519254 ACKR4Q9NPB9 350 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 TMEM14AQ9Y6G1 99 aa12.88□□□□□ -0.35
CLN8-204ENST00000519254 PHF3Q92576 2039 aaKnown RBP12.88□□□□□ -0.35
CLN8-204ENST00000519254 IGHV3-15A0A0B4J1V0 119 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 LOC102725191A0A1B0GVB3 256 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 LINC01387J3KSC0 135 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 SULT1C4O75897 302 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 MPZL1O95297 269 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 TACSTD2P09758 323 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
CLN8-204ENST00000519254 EIF1AXP47813 144 aaKnown RBP12.87□□□□□ -0.35
CLN8-204ENST00000519254 MTNR1BP49286 362 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 LHX2P50458 406 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 CSNK2A1P68400 391 aaPredicted RBP12.87□□□□□ -0.35
CLN8-204ENST00000519254 EGR3Q06889 387 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 C3AR1Q16581 482 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 MEP1BQ16820 701 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 LIPNQ5VXI9 398 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 GPAT4Q86UL3 456 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 NR2C2APQ86WQ0 139 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 YIPF7Q8N8F6 280 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 TEX19Q8NA77 164 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 THEM6Q8WUY1 208 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 HSD17B8Q92506 261 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 PDCD1LG2Q9BQ51 273 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 SRXN1Q9BYN0 137 aa12.87□□□□□ -0.35
CLN8-204ENST00000519254 CENPBD1B2RD01 187 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 PHYHO14832 338 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 CXCL13O43927 109 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 RPP14O95059 124 aaKnown RBP12.86□□□□□ -0.35
CLN8-204ENST00000519254 KRT8P05787 483 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 CARD18P57730 90 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 GLO1Q04760 184 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 TMEM225Q6GV28 225 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ESPNLQ6ZVH7 1005 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
CLN8-204ENST00000519254 LAX1Q8IWV1 398 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
CLN8-204ENST00000519254 SLC26A10Q8NG04 563 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 OR10D3Q8NH80 312 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 OR2V1Q8NHB1 315 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 MAP6Q96JE9 813 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 WDFY2Q96P53 400 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 MIXL1Q9H2W2 232 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 SLCO1C1Q9NYB5 712 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 SPRR3Q9UBC9 169 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 CHD8Q9HCK8 2581 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 SLC35F4A4IF30 521 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 RGS5O15539 181 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 GPRIN2O60269 458 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 WISP2O76076 250 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 CLDN15P56746 228 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 CLDN18P56856 261 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ADAM8P78325 824 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ZMAT1Q5H9K5 638 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 SPANXN2Q5MJ10 180 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 DNM1P34Q6PK57 102 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 UNQ9370/PRO34162Q6UXP9 181 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 FAM220AQ7Z4H9 259 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
CLN8-204ENST00000519254 UCN2Q96RP3 112 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ATF6BQ99941 703 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 SLC30A2Q9BRI3 323 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 ABCB9Q9NP78 766 aa12.86□□□□□ -0.35
CLN8-204ENST00000519254 IKZF2Q9UKS7 526 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms