RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 LSM6P62312 80 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TEKQ02763 1124 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 POU4F2Q12837 409 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TMED1Q13445 227 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 AQP6Q13520 282 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 APOFQ13790 326 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KEAP1Q14145 624 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TAB1Q15750 504 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 HIST3H3Q16695 136 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TBC1D28Q2M2D7 210 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KLHL22Q53GT1 634 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 BEX5Q5H9J7 111 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PHYHD1Q5SRE7 291 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NXNL2Q5VZ03 156 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 C12orf73Q69YU5 71 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TMEM154Q6P9G4 183 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 IZUMO2Q6UXV1 221 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NHLRC1Q6VVB1 395 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 MEPCEQ7L2J0 689 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SYT9Q86SS6 491 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ERI1Q8IV48 349 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SKA3Q8IX90 412 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 DMRTC2Q8IXT2 367 aaPredicted RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 OR6V1Q8N148 313 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NPEPL1Q8NDH3 523 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 GJC3Q8NFK1 279 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 OR51L1Q8NGJ5 315 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 OR6N2Q8NGY6 317 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 THEM6Q8WUY1 208 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 C11orf40Q8WZ69 217 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 BCL2L2Q92843 193 aaPredicted RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PIK3IP1Q96FE7 263 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 HRASLS5Q96KN8 279 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 MUS81Q96NY9 551 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 FOXN4Q96NZ1 517 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 WFIKKN1Q96NZ8 548 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TSSK2Q96PF2 358 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 MBOAT4Q96T53 435 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CNN2Q99439 309 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PITX2Q99697 317 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SPOCK3Q9BQ16 436 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ADI1Q9BV57 179 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SP140LQ9H930 580 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 MED20Q9H944 212 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 EMC7Q9NPA0 242 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 POLE4Q9NR33 117 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 RASSF1Q9NS23 344 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CENPMQ9NSP4 180 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CHCHD3Q9NX63 227 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SCN3BQ9NY72 215 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PLEK2Q9NYT0 353 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PLEKHB1Q9UF11 243 aaPredicted RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KCNN3Q9UGI6 736 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 WARS2Q9UGM6 360 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 LAMP5Q9UJQ1 280 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NDRG4Q9ULP0 352 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 RPL36Q9Y3U8 105 aaKnown RBP4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PCDHGB1Q9Y5G3 927 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TMEM14AQ9Y6G1 99 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 MED12Q93074 2177 aa4.78□□□□□ -1.64
SCARNA16.4-201ENST00000516956 UBR5O95071 2799 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PHF3Q92576 2039 aaKnown RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ARHGAP21Q5T5U3 1957 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ARPC4-TTLL3A0A0A6YYG9 625 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF593O00488 134 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PHYHO14832 338 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SLC16A6O15403 523 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SGCEO43556 437 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PRKYO43930 277 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GOSR1O95249 250 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FADS2O95864 444 aaKnown RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HRGP04196 525 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TP53P04637 393 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 H2BFMP0C1H6 154 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CBR1P16152 277 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 EDNRAP25101 427 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PTAFRP25105 342 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GRNP28799 593 aaKnown RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HSD11B1P28845 292 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ENTPD1P49961 510 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 IDH3GP51553 393 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF133P52736 654 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NUDT6P53370 316 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FOXG1P55316 489 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RPS23P62266 143 aaKnown RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SNRPGP62308 76 aaKnown RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CSNK2BP67870 215 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ACTC1P68032 377 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ACTA1P68133 377 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TUBA1BP68363 451 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TUBA4AP68366 448 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ECH1Q13011 328 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SNTB1Q13884 538 aaKnown RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 EIF2B1Q14232 305 aaKnown RBP4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ETFDHQ16134 617 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 C6orf52Q5T4I8 152 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SLC18B1Q6NT16 456 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF544Q6NX49 715 aa4.77□□□□□ -1.65
SCARNA16.4-201ENST00000516956 KCTD18Q6PI47 426 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms