RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 GNPDA2Q8TDQ7 276 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 MRPL24Q96A35 216 aaKnown RBP11.03□□□□□ -0.64
CLCN3-210ENST00000515420 LRGUKQ96M69 825 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 SNX18Q96RF0 628 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 GPA33Q99795 319 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 OR52D1Q9H346 318 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 CDH20Q9HBT6 801 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 RTTNQ86VV8 2226 aa11.03□□□□□ -0.64
CLCN3-210ENST00000515420 AQP12BA6NM10 295 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 TNFRSF11BO00300 401 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 GYG2O15488 501 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 IDH3BO43837 385 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 SSX4O60224 188 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 HEXAP06865 529 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 ERCC1P07992 297 aaPredicted RBP11.02□□□□□ -0.65
CLCN3-210ENST00000515420 RAP2AP10114 183 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 ZNF32P17041 273 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 APLNRP35414 380 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 HSF2Q03933 536 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 SGCAQ16586 387 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 RFX4Q33E94 735 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 PABPC1L2AQ5JQF8 200 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 PGBD2Q6P3X8 592 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 PGM2L1Q6PCE3 622 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 CLEC2AQ6UVW9 174 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 ZNF620Q6ZNG0 422 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 AQP12AQ8IXF9 295 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 ALDH16A1Q8IZ83 802 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 CIARTQ8N365 385 aaPredicted RBP11.02□□□□□ -0.65
CLCN3-210ENST00000515420 OR4C15Q8NGM1 316 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 HTRA1Q92743 480 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 CCDC124Q96CT7 223 aaKnown RBP11.02□□□□□ -0.65
CLCN3-210ENST00000515420 RASD2Q96D21 266 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 DOK1Q99704 481 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 RHNO1Q9BSD3 238 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 THTPAQ9BU02 230 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 REG4Q9BYZ8 158 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 BCL2L14Q9BZR8 327 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 RAB1BQ9H0U4 201 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 POLE4Q9NR33 117 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 TIMM10BQ9Y5J6 103 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 IER3IP1Q9Y5U9 82 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 CR1P17927 2039 aa11.02□□□□□ -0.65
CLCN3-210ENST00000515420 ZANQ9Y493 2812 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 A0A1W2PPL8 197 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 TMEM129A0AVI4 362 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 C12orf71A8MTZ7 269 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 H7C1C5 153 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 NDUFS8O00217 210 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 SYNGR3O43761 229 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 GPRIN2O60269 458 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 ICMTO60725 284 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 COX5BP10606 129 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 SLC25A16P16260 332 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 CTLA4P16410 223 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 LAP3P28838 519 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 CRABP1P29762 137 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 RAD52P43351 418 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 LCN6P62502 163 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 OR2T5Q6IEZ7 315 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 ZNF770Q6IQ21 691 aaPredicted RBP11.01□□□□□ -0.65
CLCN3-210ENST00000515420 DNM1P34Q6PK57 102 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 CLEC9AQ6UXN8 241 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 UNQ6126/PRO20091Q6UXV3 157 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 OR2T29Q8NH02 315 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 FAM168AQ92567 244 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 SLC7A6OSQ96CW6 309 aaPredicted RBP11.01□□□□□ -0.65
CLCN3-210ENST00000515420 CLPTM1LQ96KA5 538 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 SORCS2Q96PQ0 1159 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 BTBD10Q9BSF8 475 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 OR2H1Q9GZK4 316 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 SYT4Q9H2B2 425 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 GSX1Q9H4S2 264 aaPredicted RBP11.01□□□□□ -0.65
CLCN3-210ENST00000515420 IL20RAQ9UHF4 553 aa11.01□□□□□ -0.65
CLCN3-210ENST00000515420 NSD1Q96L73 2696 aaPredicted RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 SOCS2O14508 198 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 DNAJC8O75937 253 aaPredicted RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 CCNB2O95067 398 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 STOMP27105 288 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 APEX1P27695 318 aaKnown RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 LSM6P62312 80 aaKnown RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 PSG4Q00888 419 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 SCRN3Q0VDG4 424 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 ENDOGQ14249 297 aaKnown RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 KCNMB1Q16558 191 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 RGS7BPQ6MZT1 257 aaPredicted RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 RASSF6Q6ZTQ3 369 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 PTCHD4Q6ZW05 846 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 JAZF1Q86VZ6 243 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 GLB1L2Q8IW92 636 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 SVOPLQ8N434 492 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 ZNF525Q8N782 197 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 CPEB3Q8NE35 698 aaKnown RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 OR52L1Q8NGH7 329 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 NEU4Q8WWR8 484 aaPredicted RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 POM121L2Q96KW2 1035 aa11□□□□□ -0.65
CLCN3-210ENST00000515420 ERMAPQ96PL5 475 aaPredicted RBP11□□□□□ -0.65
CLCN3-210ENST00000515420 IFT27Q9BW83 186 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms