RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ANKRD22Q5VYY1 191 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 CEMP1Q6PRD7 247 aaPredicted RBP3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 ZFP41Q8N8Y5 198 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 OR56B2PQ8NGI1 322 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 OR10J6PQ8NGY7 276 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 FOPNLQ96NB1 174 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 CCDC77Q9BR77 488 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 NMRK1Q9NWW6 199 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF222Q9UK12 451 aa3.01□□□□□ -1.93
HMGCS1-207ENST00000514610 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 CLOCKO15516 846 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 MED6O75586 246 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 OR2J3O76001 311 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 GABARAPO95166 117 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 RAB3DO95716 219 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 SERPINA5P05154 406 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 PGAM1P18669 254 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 TWF1Q12792 350 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 PTPN20Q4JDL3 420 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 SOHLH1Q5JUK2 328 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 ARMC12Q5T9G4 340 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 PGAM4Q8N0Y7 254 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 GTPBP8Q8N3Z3 284 aaPredicted RBP3□□□□□ -1.93
HMGCS1-207ENST00000514610 OR7G2Q8NG99 324 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 OR5W2Q8NH69 310 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF430Q9H8G1 570 aaPredicted RBP3□□□□□ -1.93
HMGCS1-207ENST00000514610 ISYNA1Q9NPH2 558 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 CYTL1Q9NRR1 136 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 GOLT1BQ9Y3E0 138 aa3□□□□□ -1.93
HMGCS1-207ENST00000514610 YTHDF2Q9Y5A9 579 aaKnown RBP3□□□□□ -1.93
HMGCS1-207ENST00000514610 IGSF9BQ9UPX0 1349 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 TRIM64CA6NLI5 447 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 CTDNEP1O95476 244 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 BCHEP06276 602 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 TROVE2P10155 538 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 CEACAM6P40199 344 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 RND2P52198 227 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 ERCC8Q13216 396 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 SRSF5Q13243 272 aaKnown RBP2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 GINS1Q14691 196 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 C16orf72Q14CZ0 275 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 ALKBH6Q3KRA9 238 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 CCNJQ5T5M9 372 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 BIVMQ86UB2 503 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 PRELID2Q8N945 189 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 UBALD1Q8TB05 177 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 OR5B12Q96R08 314 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 MYCBPQ99417 103 aaPredicted RBP2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 SLC25A2Q9BXI2 301 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 C12orf10Q9HB07 376 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 USP47Q96K76 1375 aa2.99□□□□□ -1.93
HMGCS1-207ENST00000514610 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 SMCO2A6NFE2 343 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 CCDC169A6NNP5 214 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 LRRIQ3A6PVS8 624 aaPredicted RBP2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 EIF3HO15372 352 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 RP2O75695 350 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF24P17028 368 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 GPX4P36969 197 aaPredicted RBP2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 CSNK1A1P48729 337 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 RAP1AP62834 184 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 TGM3Q08188 693 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 SYCNQ0VAF6 134 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 MOBPQ13875 183 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 PON2Q15165 354 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 STK11Q15831 433 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 UBE2SQ16763 222 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 HSP90AB3PQ58FF7 597 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 PPM1LQ5SGD2 360 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 RAET1LQ5VY80 246 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 LRRC66Q68CR7 880 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 FAM71E1Q6IPT2 247 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 FBXW12Q6X9E4 464 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 CERS6Q6ZMG9 384 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 NOXO1Q8NFA2 376 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 PDXPQ96GD0 296 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF681Q96N22 645 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 NTN4Q9HB63 628 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 UVRAGQ9P2Y5 699 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF282Q9UDV7 671 aaPredicted RBP2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 OPN4Q9UHM6 478 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 CAMTA1Q9Y6Y1 1673 aa2.98□□□□□ -1.93
HMGCS1-207ENST00000514610 IGLV1-36A0A0B4J1U3 117 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 IGHV5-10-1A0A0J9YXX1 117 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 ERLIN1O75477 346 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 ACSM4P0C7M7 580 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 OR5H8P0DN80 308 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 IGHV1-8P0DP01 117 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 TNNT2P45379 298 aaPredicted RBP2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 ESRRGP62508 458 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 ADARB1P78563 741 aaKnown RBP2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 BEX3Q00994 111 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 RGNQ15493 299 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 ZNF726P1Q15940 193 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 Q5W150 140 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 ARL9Q6T311 187 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 PLET1Q6UQ28 207 aa2.97□□□□□ -1.93
HMGCS1-207ENST00000514610 NTM-AS1Q6ZSK4 140 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms