RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 CWH43Q9H720 699 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 FGF20Q9NP95 211 aaPredicted RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 C20orf96Q9NUD7 363 aaPredicted RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 LYARQ9NX58 379 aaKnown RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 TMEM9Q9P0T7 183 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 B4GALT7Q9UBV7 327 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 LSM7Q9UK45 103 aaKnown RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 MMP17Q9ULZ9 603 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ZDBF2Q9HCK1 2354 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 TRANK1O15050 2925 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 BRWD1Q9NSI6 2320 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 A0A1B0GUL6 1792 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 WDR87Q6ZQQ6 2873 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 CACNA1AO00555 2505 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 XIRP2A4UGR9 3374 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 SOX15O60248 233 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 ZNF780AO75290 641 aaPredicted RBP3.77□□□□□ -1.81
RFC1-216ENST00000514572 CRLF1O75462 422 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 THY1P04216 161 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 ANXA5P08758 320 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 ZNF24P17028 368 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 TUBG1P23258 451 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 DCKP27707 260 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 RORAP35398 523 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 NAA10P41227 235 aaPredicted RBP3.77□□□□□ -1.81
RFC1-216ENST00000514572 RGRP47804 291 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 TMED10P49755 219 aaKnown RBP3.77□□□□□ -1.81
RFC1-216ENST00000514572 IRF8Q02556 426 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 DOC2AQ14183 400 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 GPNMBQ14956 572 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 HIKESHIQ53FT3 197 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 C1orf146Q5VVC0 180 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 SLC16A14Q7RTX9 510 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 ZNF589Q86UQ0 364 aaPredicted RBP3.77□□□□□ -1.81
RFC1-216ENST00000514572 PLA2G4DQ86XP0 818 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 IQCKQ8N0W5 287 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 FNDC5Q8NAU1 212 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 OR9A1PQ8NGU1 263 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 SPATA3Q8NHX4 192 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 MRAPQ8TCY5 172 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 FAM151AQ8WW52 585 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 ACOT11Q8WXI4 607 aaPredicted RBP3.77□□□□□ -1.81
RFC1-216ENST00000514572 TEKT3Q9BXF9 490 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 C11orf49Q9H6J7 331 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 ZDHHC11Q9H8X9 412 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 LYRM4Q9HD34 91 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 ADAP2Q9NPF8 381 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 TUBG2Q9NRH3 451 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 VNN3Q9NY84 501 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 AHSPQ9NZD4 102 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 SPTBN4Q9H254 2564 aa3.77□□□□□ -1.81
RFC1-216ENST00000514572 FANCIQ9NVI1 1328 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 DDX60LQ5H9U9 1706 aaKnown RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 MYH2Q9UKX2 1941 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 ARPC4-TTLL3A0A0A6YYG9 625 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 SIRPB1O00241 398 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 NDUFAB1O14561 156 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 MRPS12O15235 138 aaKnown RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 CLPXO76031 633 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 TIMP1P01033 207 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 CCDC166P0CW27 439 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 GSTM3P21266 225 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 ATP6V1B2P21281 511 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 CMA1P23946 247 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 DLX1P56177 255 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 ERVK-25P63136 954 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 MARCH8Q5T0T0 291 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 ZNF658Q5TYW1 1059 aaPredicted RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 RFLNAQ6ZTI6 216 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 HSD17B13Q7Z5P4 300 aaPredicted RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 LHFPL3Q86UP9 236 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 GTSCR1Q86UQ5 136 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 OR10H4Q8NGA5 316 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 GPX8Q8TED1 209 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 FAM222BQ8WU58 562 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 DUS3LQ96G46 650 aaKnown RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 HSFY1Q96LI6 401 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 SMIM14Q96QK8 99 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 SLC29A1Q99808 456 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 ARHGDIGQ99819 225 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 KCTD14Q9BQ13 255 aaPredicted RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 TMEM246Q9BRR3 403 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 IQCGQ9H095 443 aaKnown RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 GBA3Q9H227 469 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 EHD1Q9H4M9 534 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 RANBP3Q9H6Z4 567 aaPredicted RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 UGT1A10Q9HAW8 530 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 QPCTLQ9NXS2 382 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 TREM2Q9NZC2 230 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 ZNF256Q9Y2P7 627 aaPredicted RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 DOCK2Q92608 1830 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 CHD7Q9P2D1 2997 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 CHD9Q3L8U1 2897 aa3.76□□□□□ -1.81
RFC1-216ENST00000514572 RAI1Q7Z5J4 1906 aaPredicted RBP3.76□□□□□ -1.81
RFC1-216ENST00000514572 DOCK1Q14185 1865 aa3.75□□□□□ -1.81
RFC1-216ENST00000514572 PTPRZ1P23471 2315 aaPredicted RBP3.75□□□□□ -1.81
RFC1-216ENST00000514572 RIF1Q5UIP0 2472 aaKnown RBP3.75□□□□□ -1.81
RFC1-216ENST00000514572 KCNE1BA0A087WTH5 132 aa3.75□□□□□ -1.81
RFC1-216ENST00000514572 KIR2DL5BA0A0G2JN68 375 aa3.75□□□□□ -1.81
RFC1-216ENST00000514572 KIR2DL5BA0A0G2JPC4 375 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms