RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 OR7E24Q6IFN5 339 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 ADAM5Q6NVV9 412 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PLBD1Q6P4A8 553 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 ZBTB49Q6ZSB9 765 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 BCDIN3DQ7Z5W3 292 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 TMEM200AQ86VY9 491 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 C17orf78Q8N4C9 275 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PROKR2Q8NFJ6 384 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 BBS1Q8NFJ9 593 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 C11orf40Q8WZ69 217 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 MUCL1Q96DR8 90 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 PLPPR2Q96GM1 343 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 DDOQ99489 341 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 OR10A4Q9H209 315 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 TOR3AQ9H497 397 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 HINT3Q9NQE9 182 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 POLE4Q9NR33 117 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 CMC2Q9NRP2 79 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 KLHL21Q9UJP4 597 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 B9D1Q9UPM9 204 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 BAIAP2Q9UQB8 552 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 AMDHD2Q9Y303 409 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 CENPEQ02224 2701 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 LRBAP50851 2863 aa8.55□□□□□ -1.04
TOPBP1-209ENST00000513818 ARPC4-TTLL3A0A0A6YYG9 625 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 IGHV1-18A0A0C4DH31 117 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 DPRXA6NFQ7 191 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 A6NNC1 897 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 IDH3BO43837 385 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 PLAUP00749 431 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 HRGP04196 525 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 OR8G3PP0DMU2 310 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 NR2C1P13056 603 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 SPI1P17947 270 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 MMP16P51512 607 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 PSMA6P60900 246 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 ESRRGP62508 458 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 MRPS34P82930 218 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 BSPH1Q075Z2 132 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 ENDOGQ14249 297 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 SNAPC1Q16533 368 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 SLX4IPQ5VYV7 408 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 C12orf73Q69YU5 71 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 DNM1P34Q6PK57 102 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 B3GLCTQ6Y288 498 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 FOXL2NBQ6ZUU3 175 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF627Q7L945 461 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC16A14Q7RTX9 510 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 LINC00346Q8IVM7 164 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 OR6K6Q8NGW6 343 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 AKR7LQ8NHP1 331 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 NRG4Q8WWG1 115 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 HSD17B8Q92506 261 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 NEUROG1Q92886 237 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 FBXO17Q96EF6 278 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 PLEKHA8Q96JA3 519 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 SNX18Q96RF0 628 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 IL4I1Q96RQ9 567 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 RSRP1Q9BUV0 290 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF416Q9BWM5 594 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 GRIP2Q9C0E4 1043 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 OR51V1Q9H2C8 321 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 RNPEPL1Q9HAU8 725 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF226Q9NYT6 803 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 AASSQ9UDR5 926 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 KCNN3Q9UGI6 736 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 RRP15Q9Y3B9 282 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 ORC6Q9Y5N6 252 aa8.54□□□□□ -1.04
TOPBP1-209ENST00000513818 PRR23D1E9PI22 279 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 FARS2O95363 451 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 WNT11O96014 354 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 HLA-DQA2P01906 255 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 TFP02787 698 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 RPLP1P05386 114 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 CECR9P0C854 216 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 PRR23D2P0DMB1 279 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF32P17041 273 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 MSR1P21757 451 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 CRABP1P29762 137 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 PEX19P40855 299 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 RAD23AP54725 363 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC34A1Q06495 639 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 RAB39AQ14964 217 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 GSG1Q2KHT4 349 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 KLHL12Q53G59 568 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 OGFRL1Q5TC84 451 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 CORO6Q6QEF8 472 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 CXXC5Q7LFL8 322 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 CPOQ8IVL8 374 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 GLB1L2Q8IW92 636 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 TCEANCQ8N8B7 351 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 SLC26A10Q8NG04 563 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 OR2T4Q8NH00 348 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 FAM81AQ8TBF8 368 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 FNDC8Q8TC99 324 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 NRGNQ92686 78 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms