RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ADAM30Q9UKF2 790 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 V9GYH0 126 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 TRBV5-7A0A0A0MS05 114 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 A0A0G2JMM0 328 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 A0A1W2PPB8 328 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 A0A1W2PRS3 328 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 ZNF726A6NNF4 738 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 TTLL8A6PVC2 850 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 NOTOA8MTQ0 251 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 KIR3DP1A8MWS1 328 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 GPR171O14626 319 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 DVL2O14641 736 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 PDCD5O14737 125 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 SRSF10O75494 262 aaKnown RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 ZFPL1O95159 310 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 SPARCP09486 303 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 PSKH1P11801 424 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RAB3BP20337 219 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 ITGA3P26006 1051 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 CFPP27918 469 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 THBS2P35442 1172 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 PSMB10P40306 273 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 CD97P48960 835 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RIDAP52758 137 aaKnown RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 GFRA1P56159 465 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 CLRN1P58418 232 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 OC90Q02509 493 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 MFAP5Q13361 173 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 EIF2B1Q14232 305 aaKnown RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 RTP5Q14D33 572 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 BCL2A1Q16548 175 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 MEP1BQ16820 701 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 Q499Y3 187 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 HSD17B12Q53GQ0 312 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 CEP78Q5JTW2 689 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 PDSS1Q5T2R2 415 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 XKRXQ6PP77 449 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 DCDC5Q6ZRR9 648 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 KRT77Q7Z794 578 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 GGNQ86UU5 652 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 LYSMD2Q8IV50 215 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 WDFY1Q8IWB7 410 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 GDPD1Q8N9F7 314 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 FAM83FQ8NEG4 500 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 OR14L1PQ8NHC6 308 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RNF133Q8WVZ7 376 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RGP1Q92546 391 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 NSMAFQ92636 917 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 COX4I2Q96KJ9 171 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 JSRP1Q96MG2 331 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 DERL3Q96Q80 235 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 AMELYQ99218 206 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 SDHCQ99643 169 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 SRRQ9GZT4 340 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 COMMD4Q9H0A8 199 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RERGLQ9H628 205 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 CCDC86Q9H6F5 360 aaKnown RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 TMEM185BQ9H7F4 350 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 ZNF703Q9H7S9 590 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 SP140LQ9H930 580 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 ELOVL3Q9HB03 270 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 ABCB9Q9NP78 766 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 FAIMQ9NVQ4 179 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RABL2AQ9UBK7 228 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 B4GALT7Q9UBV7 327 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 CYB5R1Q9UHQ9 305 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 IKZF2Q9UKS7 526 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RABL2BQ9UNT1 228 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 RCE1Q9Y256 329 aa7.45□□□□□ -1.22
RNF4-220ENST00000513578 KLF13Q9Y2Y9 288 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 NCOA6Q14686 2063 aaPredicted RBP7.45□□□□□ -1.22
RNF4-220ENST00000513578 IGKV1D-43A0A0B4J1Z2 117 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 A0A1B0GVG6 124 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 PINLYPA6NC86 204 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 OR5H15A6NDH6 313 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 G3V3Y1 287 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SMAD9O15198 467 aaKnown RBP7.44□□□□□ -1.22
RNF4-220ENST00000513578 PIN1P1O15428 100 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 RGS5O15539 181 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 NME2P1O60361 137 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 RAMP1O60894 148 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 GLSO94925 669 aaPredicted RBP7.44□□□□□ -1.22
RNF4-220ENST00000513578 GPANK1O95872 356 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 WDPCPO95876 746 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 ISG15P05161 165 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SP1P08047 785 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 RFPL3SP0C7P2 107 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 CD37P11049 281 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SRMP19623 302 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 NME2P22392 152 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 ENPP1P22413 925 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 GDF1P27539 372 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 KIR3DL2P43630 455 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 EVX1P49640 407 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 PSMD7P51665 324 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 SCAND1P57086 179 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 LSM6P62312 80 aaKnown RBP7.44□□□□□ -1.22
RNF4-220ENST00000513578 FMODQ06828 376 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 CDC20Q12834 499 aa7.44□□□□□ -1.22
RNF4-220ENST00000513578 OR1C1Q15619 314 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms