RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RAB3CQ96E17 227 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 DUX5Q96PT3 197 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SLC46A2Q9BY10 475 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SIRT3Q9NTG7 399 aaPredicted RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 POMT2Q9UKY4 750 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 TRAV27A0A087WT01 109 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 RAB19A4D1S5 217 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 HPGDSO60760 199 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 GLULP15104 373 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 WNT5AP41221 380 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 DLX5P56178 289 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 PRDX4Q13162 271 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 KCNAB2Q13303 367 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 GAMTQ14353 236 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ZNF322Q6U7Q0 402 aaPredicted RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 MED25Q71SY5 747 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 COMMD6Q7Z4G1 85 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ANKRD13BQ86YJ7 626 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 CHCHD4Q8N4Q1 142 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 OR5W2Q8NH69 310 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 NOL4LQ96MY1 436 aaPredicted RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 TMUB1Q9BVT8 246 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SLCO1B1Q9Y6L6 691 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ARL2-SNX15V9GYD0 113 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SETBP1Q9Y6X0 1596 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 A0A1W2PNR3 127 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 F5H5P2 479 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 EREGO14944 169 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 HBE1P02100 147 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 RETP07949 1114 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ZNF133P52736 654 aaPredicted RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 KLF3P57682 345 aaPredicted RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 LCN6P62502 163 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ROM1Q03395 351 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 DUSP6Q16828 381 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ANKRD22Q5VYY1 191 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 IDO2Q6ZQW0 420 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 TGIF2LYQ8IUE0 185 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SIAH1Q8IUQ4 282 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ANKRD53Q8N9V6 530 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 OR1L4Q8NGR5 311 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 INSM2Q96T92 566 aaPredicted RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 GPR173Q9NS66 373 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 F8W036 122 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 TOXO94900 526 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 S100A8P05109 93 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 MAGEB1P43366 347 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ZNF140P52738 457 aaPredicted RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 PPP1CBP62140 327 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 FAM209BQ5JX69 171 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 MOB1BQ7L9L4 216 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 HSD11B1LQ7Z5J1 315 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 OR4M1Q8NGD0 313 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 FBXO27Q8NI29 283 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SLC29A1Q99808 456 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 CHST6Q9GZX3 395 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 COQ10BQ9H8M1 238 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 KCNG2Q9UJ96 466 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SNX11Q9Y5W9 270 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 LMTK2Q8IWU2 1503 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 KIR2DS1A0A191URI9 304 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 NAP1L6A6NFF2 107 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 ANKUB1A6NFN9 424 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 GFYI3L273 518 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 K7ESF4 209 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 DCTN6O00399 190 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 FABP7O15540 132 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 AKR7A3O95154 331 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 FUCA1P04066 466 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 CDK1P06493 297 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 KIR2DS4P43632 304 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 GALNT2Q10471 571 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 KIR2DS1Q14954 304 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 CLLU1OSQ5K130 101 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 C12orf54Q6X4T0 127 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 SPICQ8N5J4 248 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 KIAA1958Q8N8K9 716 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 PLPP5Q8NEB5 264 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 OR7G3Q8NG95 312 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 SLC7A13Q8TCU3 470 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 SMOC1Q9H4F8 434 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 DLL4Q9NR61 685 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 ENPP4Q9Y6X5 453 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 C1orf196B1AJZ1 125 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 PSCAO43653 123 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 PRKACGP22612 351 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 LINC00346Q8IVM7 164 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 GALNT16Q8N428 558 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 MUL1Q969V5 352 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TVP23CQ96ET8 276 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TUBA1CQ9BQE3 449 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 RIMS3Q9UJD0 308 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 OR52A1Q9UKL2 312 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 CEP170BQ9Y4F5 1589 aaPredicted RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 SERINC4A6NH21 518 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 GPANK1O95872 356 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 PLAUP00749 431 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 IVDP26440 423 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 ELLP55199 621 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms