RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SMKR1H3BMG3 65 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 XKRYO14609 159 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 BCKDKO14874 412 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 MOSP00540 346 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 HBE1P02100 147 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 IFNW1P05000 195 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 CLTAP09496 248 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 KLK2P20151 261 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 SH3BGRP55822 239 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 KRTAP10-9P60411 292 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 NUTF2P61970 127 aaKnown RBP3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 FHL5Q5TD97 284 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 ANKRD22Q5VYY1 191 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 MRPL21Q7Z2W9 205 aaKnown RBP3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 CMTM8Q8IZV2 173 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 MITD1Q8WV92 249 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 GEMIN6Q8WXD5 167 aaKnown RBP3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 ASB9Q96DX5 294 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 CERS2Q96G23 380 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 TSSK3Q96PN8 268 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 GABARAPL3Q9BY60 117 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 LINC00597Q9H2U6 94 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 FBXO44Q9H4M3 255 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 RETNQ9HD89 108 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 RCL1Q9Y2P8 373 aaKnown RBP3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 NEURL4Q96JN8 1562 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 CENPJQ9HC77 1338 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 A0A1W2PPV4 95 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 TMEM120BA0PK00 339 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 K7EMT4 169 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 CHMP2AO43633 222 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 TRAF3IP2O43734 574 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 FKBP6O75344 327 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 IGKV3-15P01624 115 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 BGLAPP02818 100 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZDHHC11BP0C7U3 371 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 SLC26A3P40879 764 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 NBL1P41271 181 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 SLC1A2P43004 574 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 CAV2P51636 162 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 GGTLC2Q14390 218 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 PSMD5Q16401 504 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 GUCA2BQ16661 112 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 KCTD19Q17RG1 926 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 RPEL1Q2QD12 228 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 RFX4Q33E94 735 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 LYPD2Q6UXB3 125 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 TEX43Q6ZNM6 134 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 LINC01555Q8NAE3 123 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 INO80EQ8NBZ0 244 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR2L5Q8NG80 312 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR6X1Q8NH79 312 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 RAB1CQ92928 201 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 CIDECQ96AQ7 238 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR5B12Q96R08 314 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR2M2Q96R28 347 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 TMEM38AQ9H6F2 299 aa3.75□□□□□ -1.81
HMGB1P47-201ENST00000511281 GTF3C1Q12789 2109 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 TSPAN11A1L157 253 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 SERPINE3A8MV23 424 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 SIVA1O15304 175 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 NUPL2O15504 423 aaKnown RBP3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 TNFSF13O75888 250 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 IVLP07476 585 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 BMI1P35226 326 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 ETV1P50549 477 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 REG3AQ06141 175 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 PON3Q15166 354 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZNF630Q2M218 657 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 KRTAP27-1Q3LI81 207 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 PAGE3Q5JUK9 113 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 NPSR1Q6W5P4 371 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 LINC00173Q6ZV60 143 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 STPG2Q8N412 459 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR10J6PQ8NGY7 276 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 CD300LFQ8TDQ1 290 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 CFAP53Q96M91 514 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 NRTNQ99748 197 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 DEFB129Q9H1M3 183 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 CD209Q9NNX6 404 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 PRSS16Q9NQE7 514 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 PLSCR3Q9NRY6 295 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZNF226Q9NYT6 803 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 SLC25A37Q9NYZ2 338 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 TP53TG5Q9Y2B4 290 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 COMMD3-BMI1R4GMX3 469 aa3.74□□□□□ -1.81
HMGB1P47-201ENST00000511281 UBN2Q6ZU65 1347 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 TRAV6A0A075B6T7 132 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 HIDE1A8MVS5 230 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 RAD51CO43502 376 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 SCELO95171 688 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 ARG1P05089 322 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 IGHV4-34P06331 123 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 S100A9P06702 114 aaKnown RBP3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 KRTAP1-4P0C5Y4 121 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 UBTFL6P0CB48 400 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 CALM1P0DP23 149 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 CALM2P0DP24 149 aa3.73□□□□□ -1.81
HMGB1P47-201ENST00000511281 CALM3P0DP25 149 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms