RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 EIF5AP63241 154 aaKnown RBP13.53□□□□□ -0.24
USP38-202ENST00000510377 PAPD4Q6PIY7 484 aaKnown RBP13.53□□□□□ -0.24
USP38-202ENST00000510377 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 MARC2Q969Z3 335 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 OPN4Q9UHM6 478 aa13.53□□□□□ -0.24
USP38-202ENST00000510377 LILRB3O75022 631 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 AKR7A3O95154 331 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 GABRA1P14867 456 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 NME2P22392 152 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 DHPSP49366 369 aaPredicted RBP13.52□□□□□ -0.24
USP38-202ENST00000510377 SNTB1Q13884 538 aaKnown RBP13.52□□□□□ -0.24
USP38-202ENST00000510377 ETFBKMTQ8IXQ9 262 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 PNLDC1Q8NA58 520 aaKnown RBP13.52□□□□□ -0.24
USP38-202ENST00000510377 OR11A1Q9GZK7 315 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 EIF5A2Q9GZV4 153 aaKnown RBP13.52□□□□□ -0.24
USP38-202ENST00000510377 PDE7BQ9NP56 450 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 C2orf42Q9NWW7 574 aa13.52□□□□□ -0.24
USP38-202ENST00000510377 LSM5Q9Y4Y9 91 aaKnown RBP13.52□□□□□ -0.24
USP38-202ENST00000510377 H7C417 338 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 SEC14L5O43304 696 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 STK17BO94768 372 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 IFNA21P01568 189 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 NMBP08949 121 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 RAB3AP20336 220 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 NPY4RP50391 375 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 CSNK2A1P68400 391 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 POU3F1Q03052 451 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 SGCAQ16586 387 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 DEFB123Q8N688 67 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 CSNK2A3Q8NEV1 391 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 CCDC74AQ96AQ1 378 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 ZNF764Q96H86 408 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 MTFP1Q9UDX5 166 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 C14orf166Q9Y224 244 aaKnown RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 COA3Q9Y2R0 106 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 CNOT1A5YKK6 2376 aaKnown RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 A0A0G2JK05 382 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 SEMA4FO95754 770 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 IL5P05113 134 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 LIMK1P53667 647 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 FAM53BQ14153 422 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 ABCA11PQ4W5N1 156 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 OR52W1Q6IF63 320 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 CBLN3Q6UW01 205 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 LRRTM1Q86UE6 522 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 OR5H2Q8NGV7 314 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 NEK7Q8TDX7 302 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 KISS1RQ969F8 398 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 CMBLQ96DG6 245 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 KTI12Q96EK9 354 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 SHDQ96IW2 340 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 CFHR5Q9BXR6 569 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 ZNF700Q9H0M5 742 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 EVA1AQ9H8M9 152 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 DHCR7Q9UBM7 475 aaKnown RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 ZNF223Q9UK11 482 aaPredicted RBP13.52□□□□□ -0.25
USP38-202ENST00000510377 SLC17A4Q9Y2C5 497 aa13.52□□□□□ -0.25
USP38-202ENST00000510377 A0A087WV62 115 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 LDOC1O95751 146 aaPredicted RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 VSIG10L2P0DP72 767 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 GAAP10253 952 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 TLE3Q04726 772 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 PMPCAQ10713 525 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 PRICKLE4Q2TBC4 344 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 CHRFAM7AQ494W8 412 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 MRGPREQ86SM8 312 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 FAM219AQ8IW50 185 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 OR13H1Q8NG92 308 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 STK35Q8TDR2 534 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 SLC25A38Q96DW6 304 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 NECAB3Q96P71 396 aaPredicted RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 RPS10P5Q9NQ39 176 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 MRM2Q9UI43 246 aaKnown RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 TTC28Q96AY4 2481 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 A0A0A6YYH2 397 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 A6NJ64 397 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 ZNF726A6NNF4 738 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 PIN1P1O15428 100 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 RBM39Q14498 530 aaKnown RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 NPEPL1Q8NDH3 523 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 LPAR4Q99677 370 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 SLC25A21Q9BQT8 299 aaPredicted RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 TPSD1Q9BZJ3 242 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 DNTTIP1Q9H147 329 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 ZNF230Q9UIE0 474 aaPredicted RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 A0A087WUJ7 227 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 GSTZ1O43708 216 aaPredicted RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 CCINQ13939 588 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 WDR38Q5JTN6 314 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 TMEM225Q6GV28 225 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 ABHD12BQ7Z5M8 362 aaPredicted RBP13.51□□□□□ -0.25
USP38-202ENST00000510377 CMIPQ8IY22 773 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 SPICQ8N5J4 248 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 BPIFCQ8NFQ6 507 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 TOMM40LQ969M1 308 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 FRRS1LQ9P0K9 344 aa13.51□□□□□ -0.25
USP38-202ENST00000510377 IL9P15248 144 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 RAB5BP61020 215 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms