RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CCNB1IP1Q9NPC3 277 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 NKIRAS2Q9NYR9 191 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 TREM2Q9NZC2 230 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 RHCGQ9UBD6 479 aa11.09□□□□□ -0.63
HMGCS1-205ENST00000508319 TRAV27A0A087WT01 109 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 HTR3EA5X5Y0 456 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 J3KTA2 159 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 SLC22A2O15244 555 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 CDC14BO60729 498 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 IGHV3-13P01766 116 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 MSMBP08118 114 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 ITGA2P17301 1181 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 PCMT1P22061 227 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 YAP1P46937 504 aaKnown RBP11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 PSG4Q00888 419 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 GUCY1A3Q02108 690 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 SGCAQ16586 387 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 SPATA46Q5T0L3 261 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 FAM27BQ5VT28 67 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 FAM205BPQ63HN1 556 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 FOXL2NBQ6ZUU3 175 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 RFPL4BQ6ZWI9 263 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 SLC15A3Q8IY34 581 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 OR13C2Q8NGS9 318 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 OR51F2Q8NH61 342 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 AKR7LQ8NHP1 331 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 IPCEF1Q8WWN9 437 aaPredicted RBP11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 LZICQ8WZA0 190 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 WNT5BQ9H1J7 359 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 KCNN2Q9H2S1 579 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 CCDC134Q9H6E4 229 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF446Q9NWS9 450 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 HIF1ANQ9NWT6 349 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 CACNG2Q9Y698 323 aa11.08□□□□□ -0.64
HMGCS1-205ENST00000508319 IGHV1-69-2A0A0G2JMI3 117 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 C5orf49A4QMS7 147 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 NME4O00746 187 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 TCF21O43680 179 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 ICMTO60725 284 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 PRSS23O95084 383 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 IFNW1P05000 195 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 CCNOP22674 350 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 LAP3P28838 519 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 MPV17P39210 176 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 CRYBB2P43320 205 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 MMP15P51511 669 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 CTXN1P60606 82 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 LIPEQ05469 1076 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 PRKCDQ05655 676 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 TRAM2Q15035 370 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 THEM4Q5T1C6 240 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 LIPNQ5VXI9 398 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 C8orf82Q6P1X6 216 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 ARPINQ7Z6K5 226 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 FAM156AQ8NDB6 213 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 OR51A7Q8NH64 312 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 SLC25A40Q8TBP6 338 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 FNDC8Q8TC99 324 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 GEMIN6Q8WXD5 167 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 MARS2Q96GW9 593 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 LRRC37BQ96QE4 947 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 FNDC11Q9BVV2 318 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 SAP30LQ9HAJ7 183 aa11.07□□□□□ -0.64
HMGCS1-205ENST00000508319 A0A087WUU8 490 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 A6NIZ1 184 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 H7C1C5 153 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 CXCR6O00574 342 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 CDC42EP2O14613 210 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 DEAF1O75398 565 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF682O95780 498 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 IGHV1-46P01743 117 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 CST2P09228 141 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF26P17031 533 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 DRD4P21917 467 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 IFNA8P32881 189 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 GPR4P46093 362 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 SLC9A3P48764 834 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 GDI2P50395 445 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 SLC7A2P52569 658 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 RAP1BP61224 184 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 LCN6P62502 163 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 RAP1AP62834 184 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ENDOGQ14249 297 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 MOGQ16653 247 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 TSTQ16762 297 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ZNF718Q3SXZ3 478 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ANKDD1AQ495B1 522 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 FAM209AQ5JX71 171 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 AVPI1Q5T686 147 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 MBNL2Q5VZF2 373 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 USP51Q70EK9 711 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 CBLL1Q75N03 491 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 OAFQ86UD1 273 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 RP9Q8TA86 221 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 ACOT11Q8WXI4 607 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 HSH2DQ96JZ2 352 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 RBP7Q96R05 134 aa11.06□□□□□ -0.64
HMGCS1-205ENST00000508319 OR2J1Q9GZK6 312 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms