RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 EBF4Q9BQW3 602 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 CAPS2Q9BXY5 557 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 FBXO44Q9H4M3 255 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 POLE4Q9NR33 117 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 TREM2Q9NZC2 230 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 GCNT4Q9P109 453 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 CDH9Q9ULB4 789 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 COPS3Q9UNS2 423 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 UGT2A1Q9Y4X1 527 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 COL4A2P08572 1712 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 TENM4Q6N022 2769 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 HECTD1Q9ULT8 2610 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 TRAV26-1A0A087WT03 109 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 A0A1B0GTQ1 180 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 FAM231BA6NCW3 169 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 IDSB3KWA1 339 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 IL1BP01584 269 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 IGHG4P01861 327 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 IGHDP01880 384 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 GP1BAP07359 652 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 DBTP11182 482 aaKnown RBP4.16□□□□□ -1.74
HERC4-213ENST00000506515 COX5AP20674 150 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 GABRR1P24046 479 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 GRIA1P42261 906 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 EFNB2P52799 333 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 PKNOX1P55347 436 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 CSNK1G2P78368 415 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 HERPUD1Q15011 391 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 DPYSL2Q16555 572 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 DMRTC1Q5HYR2 192 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 OR4F3Q6IEY1 312 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 TMEM150AQ86TG1 271 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 ERI1Q8IV48 349 aaKnown RBP4.16□□□□□ -1.74
HERC4-213ENST00000506515 ZCCHC7Q8N3Z6 543 aaKnown RBP4.16□□□□□ -1.74
HERC4-213ENST00000506515 DEFB119Q8N690 84 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 OR5D13Q8NGL4 314 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 OR1E3Q8WZA6 343 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 NUS1Q96E22 293 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 COQ2Q96H96 371 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 RPRD1AQ96P16 312 aaPredicted RBP4.16□□□□□ -1.74
HERC4-213ENST00000506515 GON7Q9BXV9 100 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 OR51J1Q9H342 316 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 PDFQ9HBH1 243 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 BTNL2Q9UIR0 455 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 CFAP46Q8IYW2 2715 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 PTPRDP23468 1912 aa4.16□□□□□ -1.74
HERC4-213ENST00000506515 NOTCH2Q04721 2471 aa4.15□□□□□ -1.74
HERC4-213ENST00000506515 MYH10P35580 1976 aa4.15□□□□□ -1.74
HERC4-213ENST00000506515 A0A0J9YXY3 114 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 HELTA6NFD8 242 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 DCTN6O00399 190 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 SLC16A4O15374 487 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 CACNG3O60359 315 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 MMP23AO75900 390 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 ACTL6AO96019 429 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 OPN1MWP04001 364 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 OPN1MW2P0DN77 364 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 OPN1MW3P0DN78 364 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 CXCL8P10145 99 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 POU2F1P14859 743 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 U2AF2P26368 475 aaKnown RBP eCLIP4.15□□□□□ -1.753e-11■■■□□ 16.4
HERC4-213ENST00000506515 CALCRP30988 508 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 UGT1A5P35504 534 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 ATP5C1P36542 298 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 PTGDSP41222 190 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 TNFSF9P41273 254 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 MAP3K8P41279 467 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 CSNK1EP49674 416 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 TPMTP51580 245 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 EIF3IQ13347 325 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 GRB7Q14451 532 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 PDZK1Q5T2W1 519 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 GPRC6AQ5T6X5 926 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 KDELC1Q6UW63 502 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 ZNF679Q8IYX0 411 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 EIF1ADQ8N9N8 165 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 MFSD9Q8NBP5 474 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 TMEM161BQ8NDZ6 487 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 CHCHD10Q8WYQ3 142 aaPredicted RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 DCUN1D4Q92564 292 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 TIMD4Q96H15 378 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 SLC38A2Q96QD8 506 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 ARHGDIGQ99819 225 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 BBS2Q9BXC9 721 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 POLR2J2Q9GZM3 115 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 POLR2J3Q9H1A7 115 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 NARFLQ9H6Q4 476 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 LRRC40Q9H9A6 602 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 ZDHHC4Q9NPG8 344 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 DDX19AQ9NUU7 478 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 STAP1Q9ULZ2 295 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 TNRC6BQ9UPQ9 1833 aaKnown RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 MYOFQ9NZM1 2061 aa4.15□□□□□ -1.75
HERC4-213ENST00000506515 RP1L1Q8IWN7 2480 aaPredicted RBP4.15□□□□□ -1.75
HERC4-213ENST00000506515 TEX15Q9BXT5 2789 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 TSC2P49815 1807 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 ZW10O43264 779 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 EMC8O43402 210 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 STAMBPO95630 424 aa4.14□□□□□ -1.75
HERC4-213ENST00000506515 LGI1O95970 557 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms