RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 IER3IP1Q9Y5U9 82 aa8.58□□□□□ -1.04
NR1I3-220ENST00000505005 IGHV1-18A0A0C4DH31 117 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 RIIAD1A6NNX1 92 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SIAH2O43255 324 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 GASTP01350 101 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 APOC1P02654 83 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 CECR9P0C854 216 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 DANCRP0C864 163 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF823P16415 610 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF14P17017 642 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF3P17036 446 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 NR4A1P22736 598 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SERPINF1P36955 418 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 GIPRP48546 466 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 RGS6P49758 472 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 GDI2P50395 445 aaKnown RBP8.57□□□□□ -1.04
NR1I3-220ENST00000505005 IDH3GP51553 393 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-220ENST00000505005 FOXG1P55316 489 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-220ENST00000505005 KRTAP10-9P60411 292 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 NKX6-1P78426 367 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-220ENST00000505005 MYBPC1Q00872 1141 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 LGALS3BPQ08380 585 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 NPRL3Q12980 569 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SEC23BQ15437 767 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 EFNB3Q15768 340 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 KCNMB1Q16558 191 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ZMAT1Q5H9K5 638 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SLC27A4Q6P1M0 643 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SHQ1Q6PI26 577 aaKnown RBP8.57□□□□□ -1.04
NR1I3-220ENST00000505005 LINGO2Q7L985 606 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 MDP1Q86V88 176 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SKA3Q8IX90 412 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 LNX2Q8N448 690 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF540Q8NDQ6 660 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 OR5L1Q8NGL2 311 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 OR2AJ1Q8NGZ0 328 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 OR5K1Q8NHB7 308 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 C11orf40Q8WZ69 217 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ITFG2Q969R8 447 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 Q96M85 177 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 RAB1BQ9H0U4 201 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SP140LQ9H930 580 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 S100A14Q9HCY8 104 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 CA10Q9NS85 328 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 TBC1D23Q9NUY8 699 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SLCO1C1Q9NYB5 712 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 NPAP1Q9NZP6 1156 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 PDP1Q9P0J1 537 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ITGB1BP2Q9UKP3 347 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 LAMP3Q9UQV4 416 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 ABCA12Q86UK0 2595 aa8.57□□□□□ -1.04
NR1I3-220ENST00000505005 SPG11Q96JI7 2443 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 A0A1W2PPL8 197 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 H3BN98 237 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 H7C417 338 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 OVOL3O00110 214 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 SLC16A7O60669 478 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 HLA-HP01893 362 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 OSMP13725 252 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 ESRRGP62508 458 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 LSM11P83369 360 aaKnown RBP eCLIP8.56□□□□□ -1.04
NR1I3-220ENST00000505005 SLC34A1Q06495 639 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 FHL1Q13642 323 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 RCN1Q15293 331 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 PHYHD1Q5SRE7 291 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF770Q6IQ21 691 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-220ENST00000505005 UGT2A3Q6UWM9 527 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 RHOUQ7L0Q8 258 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 ZBTB46Q86UZ6 589 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 ATG16L2Q8NAA4 619 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 NPEPL1Q8NDH3 523 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 CPEB3Q8NE35 698 aaKnown RBP8.56□□□□□ -1.04
NR1I3-220ENST00000505005 SLC30A7Q8NEW0 376 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 KBTBD8Q8NFY9 601 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 NEU4Q8WWR8 484 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-220ENST00000505005 NSMAFQ92636 917 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 NMD3Q96D46 503 aaKnown RBP8.56□□□□□ -1.04
NR1I3-220ENST00000505005 PLEKHA8Q96JA3 519 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 SAMD8Q96LT4 415 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 MYCBPQ99417 103 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-220ENST00000505005 TRAF4Q9BUZ4 470 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-220ENST00000505005 TSSK6Q9BXA6 273 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 C1QTNF6Q9BXI9 259 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 VCX3BQ9H321 246 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 PLK3Q9H4B4 646 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 POLE4Q9NR33 117 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 CYSLTR2Q9NS75 346 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 POLR1DQ9Y2S0 133 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 ORC6Q9Y5N6 252 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 U3KQV3 271 aa8.56□□□□□ -1.04
NR1I3-220ENST00000505005 NBPF19A0A087WUL8 3843 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 IGHV2OR16-5A0A0B4J2B6 119 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 A0A1W2PR80 420 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 OR6C6A6NF89 314 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 E7EQL1 145 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 G3V2T6 193 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 NDUFS8O00217 210 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 SOCS2O14508 198 aa8.55□□□□□ -1.04
NR1I3-220ENST00000505005 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-220ENST00000505005 ICMTO60725 284 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms